Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24978 | 75157;75158;75159 | chr2:178571200;178571199;178571198 | chr2:179435927;179435926;179435925 |
N2AB | 23337 | 70234;70235;70236 | chr2:178571200;178571199;178571198 | chr2:179435927;179435926;179435925 |
N2A | 22410 | 67453;67454;67455 | chr2:178571200;178571199;178571198 | chr2:179435927;179435926;179435925 |
N2B | 15913 | 47962;47963;47964 | chr2:178571200;178571199;178571198 | chr2:179435927;179435926;179435925 |
Novex-1 | 16038 | 48337;48338;48339 | chr2:178571200;178571199;178571198 | chr2:179435927;179435926;179435925 |
Novex-2 | 16105 | 48538;48539;48540 | chr2:178571200;178571199;178571198 | chr2:179435927;179435926;179435925 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs1708062798 | None | 0.994 | N | 0.62 | 0.277 | 0.234412748748 | gnomAD-4.0.0 | 1.59182E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85923E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1539 | likely_benign | 0.1662 | benign | -0.938 | Destabilizing | 0.919 | D | 0.528 | neutral | N | 0.478498809 | None | None | N |
E/C | 0.8477 | likely_pathogenic | 0.8548 | pathogenic | -0.566 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
E/D | 0.3773 | ambiguous | 0.3311 | benign | -1.368 | Destabilizing | 0.958 | D | 0.41 | neutral | N | 0.4751939 | None | None | N |
E/F | 0.8384 | likely_pathogenic | 0.8423 | pathogenic | -0.385 | Destabilizing | 0.995 | D | 0.804 | deleterious | None | None | None | None | N |
E/G | 0.2671 | likely_benign | 0.2771 | benign | -1.356 | Destabilizing | 0.988 | D | 0.709 | prob.delet. | N | 0.500984384 | None | None | N |
E/H | 0.7797 | likely_pathogenic | 0.7768 | pathogenic | -0.793 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/I | 0.4545 | ambiguous | 0.458 | ambiguous | 0.224 | Stabilizing | 0.991 | D | 0.808 | deleterious | None | None | None | None | N |
E/K | 0.4672 | ambiguous | 0.4946 | ambiguous | -0.993 | Destabilizing | 0.958 | D | 0.467 | neutral | N | 0.471697953 | None | None | N |
E/L | 0.5038 | ambiguous | 0.5188 | ambiguous | 0.224 | Stabilizing | 0.982 | D | 0.733 | prob.delet. | None | None | None | None | N |
E/M | 0.4914 | ambiguous | 0.5049 | ambiguous | 0.8 | Stabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
E/N | 0.5627 | ambiguous | 0.5413 | ambiguous | -1.409 | Destabilizing | 0.991 | D | 0.663 | neutral | None | None | None | None | N |
E/P | 0.6437 | likely_pathogenic | 0.6476 | pathogenic | -0.142 | Destabilizing | 0.995 | D | 0.803 | deleterious | None | None | None | None | N |
E/Q | 0.2231 | likely_benign | 0.2386 | benign | -1.208 | Destabilizing | 0.994 | D | 0.62 | neutral | N | 0.470078565 | None | None | N |
E/R | 0.5819 | likely_pathogenic | 0.6097 | pathogenic | -0.774 | Destabilizing | 0.991 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/S | 0.2824 | likely_benign | 0.2754 | benign | -1.849 | Destabilizing | 0.938 | D | 0.471 | neutral | None | None | None | None | N |
E/T | 0.3269 | likely_benign | 0.3279 | benign | -1.495 | Destabilizing | 0.086 | N | 0.351 | neutral | None | None | None | None | N |
E/V | 0.2977 | likely_benign | 0.3065 | benign | -0.142 | Destabilizing | 0.976 | D | 0.701 | prob.neutral | N | 0.469473135 | None | None | N |
E/W | 0.9632 | likely_pathogenic | 0.9647 | pathogenic | -0.226 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
E/Y | 0.7999 | likely_pathogenic | 0.7973 | pathogenic | -0.156 | Destabilizing | 0.998 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.