Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25032 | 75319;75320;75321 | chr2:178571038;178571037;178571036 | chr2:179435765;179435764;179435763 |
N2AB | 23391 | 70396;70397;70398 | chr2:178571038;178571037;178571036 | chr2:179435765;179435764;179435763 |
N2A | 22464 | 67615;67616;67617 | chr2:178571038;178571037;178571036 | chr2:179435765;179435764;179435763 |
N2B | 15967 | 48124;48125;48126 | chr2:178571038;178571037;178571036 | chr2:179435765;179435764;179435763 |
Novex-1 | 16092 | 48499;48500;48501 | chr2:178571038;178571037;178571036 | chr2:179435765;179435764;179435763 |
Novex-2 | 16159 | 48700;48701;48702 | chr2:178571038;178571037;178571036 | chr2:179435765;179435764;179435763 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.997 | N | 0.691 | 0.252 | 0.28492961333 | gnomAD-4.0.0 | 2.73904E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70065E-06 | 0 | 1.65804E-05 |
Y/S | None | None | 0.125 | N | 0.394 | 0.216 | 0.260735089382 | gnomAD-4.0.0 | 6.84761E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00218E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.6563 | likely_pathogenic | 0.6192 | pathogenic | -1.011 | Destabilizing | 0.754 | D | 0.574 | neutral | None | None | None | None | I |
Y/C | 0.2455 | likely_benign | 0.2186 | benign | 0.154 | Stabilizing | 0.997 | D | 0.691 | prob.neutral | N | 0.46955318 | None | None | I |
Y/D | 0.4639 | ambiguous | 0.4631 | ambiguous | 0.75 | Stabilizing | 0.942 | D | 0.68 | prob.neutral | N | 0.464227737 | None | None | I |
Y/E | 0.8103 | likely_pathogenic | 0.8018 | pathogenic | 0.733 | Stabilizing | 0.956 | D | 0.549 | neutral | None | None | None | None | I |
Y/F | 0.1247 | likely_benign | 0.124 | benign | -0.63 | Destabilizing | 0.014 | N | 0.289 | neutral | N | 0.479621264 | None | None | I |
Y/G | 0.5318 | ambiguous | 0.4963 | ambiguous | -1.224 | Destabilizing | 0.754 | D | 0.569 | neutral | None | None | None | None | I |
Y/H | 0.2837 | likely_benign | 0.2794 | benign | -0.089 | Destabilizing | 0.99 | D | 0.533 | neutral | N | 0.471887215 | None | None | I |
Y/I | 0.7679 | likely_pathogenic | 0.7378 | pathogenic | -0.457 | Destabilizing | 0.956 | D | 0.516 | neutral | None | None | None | None | I |
Y/K | 0.7631 | likely_pathogenic | 0.7566 | pathogenic | 0.152 | Stabilizing | 0.956 | D | 0.56 | neutral | None | None | None | None | I |
Y/L | 0.6913 | likely_pathogenic | 0.645 | pathogenic | -0.457 | Destabilizing | 0.754 | D | 0.595 | neutral | None | None | None | None | I |
Y/M | 0.7617 | likely_pathogenic | 0.7371 | pathogenic | -0.066 | Destabilizing | 0.998 | D | 0.585 | neutral | None | None | None | None | I |
Y/N | 0.2056 | likely_benign | 0.2143 | benign | 0.104 | Stabilizing | 0.942 | D | 0.657 | neutral | N | 0.49516672 | None | None | I |
Y/P | 0.9832 | likely_pathogenic | 0.9807 | pathogenic | -0.623 | Destabilizing | 0.978 | D | 0.691 | prob.neutral | None | None | None | None | I |
Y/Q | 0.7037 | likely_pathogenic | 0.6896 | pathogenic | 0.066 | Stabilizing | 0.956 | D | 0.572 | neutral | None | None | None | None | I |
Y/R | 0.5499 | ambiguous | 0.5476 | ambiguous | 0.519 | Stabilizing | 0.956 | D | 0.661 | neutral | None | None | None | None | I |
Y/S | 0.273 | likely_benign | 0.2657 | benign | -0.411 | Destabilizing | 0.125 | N | 0.394 | neutral | N | 0.43979344 | None | None | I |
Y/T | 0.5987 | likely_pathogenic | 0.5793 | pathogenic | -0.335 | Destabilizing | 0.915 | D | 0.534 | neutral | None | None | None | None | I |
Y/V | 0.6182 | likely_pathogenic | 0.5825 | pathogenic | -0.623 | Destabilizing | 0.86 | D | 0.557 | neutral | None | None | None | None | I |
Y/W | 0.4719 | ambiguous | 0.4486 | ambiguous | -0.658 | Destabilizing | 0.998 | D | 0.532 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.