Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2503275319;75320;75321 chr2:178571038;178571037;178571036chr2:179435765;179435764;179435763
N2AB2339170396;70397;70398 chr2:178571038;178571037;178571036chr2:179435765;179435764;179435763
N2A2246467615;67616;67617 chr2:178571038;178571037;178571036chr2:179435765;179435764;179435763
N2B1596748124;48125;48126 chr2:178571038;178571037;178571036chr2:179435765;179435764;179435763
Novex-11609248499;48500;48501 chr2:178571038;178571037;178571036chr2:179435765;179435764;179435763
Novex-21615948700;48701;48702 chr2:178571038;178571037;178571036chr2:179435765;179435764;179435763
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: Y
  • RefSeq wild type transcript codon: TAT
  • RefSeq wild type template codon: ATA
  • Domain: Fn3-70
  • Domain position: 27
  • Structural Position: 29
  • Q(SASA): 0.4882
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
Y/C None None 0.997 N 0.691 0.252 0.28492961333 gnomAD-4.0.0 2.73904E-06 None None None None I None 0 0 None 0 0 None 0 0 2.70065E-06 0 1.65804E-05
Y/S None None 0.125 N 0.394 0.216 0.260735089382 gnomAD-4.0.0 6.84761E-07 None None None None I None 0 0 None 0 0 None 0 0 9.00218E-07 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
Y/A 0.6563 likely_pathogenic 0.6192 pathogenic -1.011 Destabilizing 0.754 D 0.574 neutral None None None None I
Y/C 0.2455 likely_benign 0.2186 benign 0.154 Stabilizing 0.997 D 0.691 prob.neutral N 0.46955318 None None I
Y/D 0.4639 ambiguous 0.4631 ambiguous 0.75 Stabilizing 0.942 D 0.68 prob.neutral N 0.464227737 None None I
Y/E 0.8103 likely_pathogenic 0.8018 pathogenic 0.733 Stabilizing 0.956 D 0.549 neutral None None None None I
Y/F 0.1247 likely_benign 0.124 benign -0.63 Destabilizing 0.014 N 0.289 neutral N 0.479621264 None None I
Y/G 0.5318 ambiguous 0.4963 ambiguous -1.224 Destabilizing 0.754 D 0.569 neutral None None None None I
Y/H 0.2837 likely_benign 0.2794 benign -0.089 Destabilizing 0.99 D 0.533 neutral N 0.471887215 None None I
Y/I 0.7679 likely_pathogenic 0.7378 pathogenic -0.457 Destabilizing 0.956 D 0.516 neutral None None None None I
Y/K 0.7631 likely_pathogenic 0.7566 pathogenic 0.152 Stabilizing 0.956 D 0.56 neutral None None None None I
Y/L 0.6913 likely_pathogenic 0.645 pathogenic -0.457 Destabilizing 0.754 D 0.595 neutral None None None None I
Y/M 0.7617 likely_pathogenic 0.7371 pathogenic -0.066 Destabilizing 0.998 D 0.585 neutral None None None None I
Y/N 0.2056 likely_benign 0.2143 benign 0.104 Stabilizing 0.942 D 0.657 neutral N 0.49516672 None None I
Y/P 0.9832 likely_pathogenic 0.9807 pathogenic -0.623 Destabilizing 0.978 D 0.691 prob.neutral None None None None I
Y/Q 0.7037 likely_pathogenic 0.6896 pathogenic 0.066 Stabilizing 0.956 D 0.572 neutral None None None None I
Y/R 0.5499 ambiguous 0.5476 ambiguous 0.519 Stabilizing 0.956 D 0.661 neutral None None None None I
Y/S 0.273 likely_benign 0.2657 benign -0.411 Destabilizing 0.125 N 0.394 neutral N 0.43979344 None None I
Y/T 0.5987 likely_pathogenic 0.5793 pathogenic -0.335 Destabilizing 0.915 D 0.534 neutral None None None None I
Y/V 0.6182 likely_pathogenic 0.5825 pathogenic -0.623 Destabilizing 0.86 D 0.557 neutral None None None None I
Y/W 0.4719 ambiguous 0.4486 ambiguous -0.658 Destabilizing 0.998 D 0.532 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.