Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25039 | 75340;75341;75342 | chr2:178571017;178571016;178571015 | chr2:179435744;179435743;179435742 |
N2AB | 23398 | 70417;70418;70419 | chr2:178571017;178571016;178571015 | chr2:179435744;179435743;179435742 |
N2A | 22471 | 67636;67637;67638 | chr2:178571017;178571016;178571015 | chr2:179435744;179435743;179435742 |
N2B | 15974 | 48145;48146;48147 | chr2:178571017;178571016;178571015 | chr2:179435744;179435743;179435742 |
Novex-1 | 16099 | 48520;48521;48522 | chr2:178571017;178571016;178571015 | chr2:179435744;179435743;179435742 |
Novex-2 | 16166 | 48721;48722;48723 | chr2:178571017;178571016;178571015 | chr2:179435744;179435743;179435742 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1272032995 | None | 0.958 | N | 0.461 | 0.354 | 0.300784259202 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/A | rs1272032995 | None | 0.958 | N | 0.461 | 0.354 | 0.300784259202 | gnomAD-4.0.0 | 2.0301E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.40998E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2122 | likely_benign | 0.2252 | benign | -0.859 | Destabilizing | 0.958 | D | 0.461 | neutral | N | 0.497047591 | None | None | I |
T/C | 0.6784 | likely_pathogenic | 0.6954 | pathogenic | -0.549 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
T/D | 0.8544 | likely_pathogenic | 0.8608 | pathogenic | -0.517 | Destabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | I |
T/E | 0.7636 | likely_pathogenic | 0.7938 | pathogenic | -0.534 | Destabilizing | 0.995 | D | 0.779 | deleterious | None | None | None | None | I |
T/F | 0.6233 | likely_pathogenic | 0.68 | pathogenic | -1.065 | Destabilizing | 0.991 | D | 0.84 | deleterious | None | None | None | None | I |
T/G | 0.6371 | likely_pathogenic | 0.6322 | pathogenic | -1.086 | Destabilizing | 0.995 | D | 0.687 | prob.neutral | None | None | None | None | I |
T/H | 0.7026 | likely_pathogenic | 0.733 | pathogenic | -1.399 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | I |
T/I | 0.204 | likely_benign | 0.2804 | benign | -0.351 | Destabilizing | 0.976 | D | 0.646 | neutral | N | 0.486545316 | None | None | I |
T/K | 0.6541 | likely_pathogenic | 0.6916 | pathogenic | -0.726 | Destabilizing | 0.995 | D | 0.744 | deleterious | None | None | None | None | I |
T/L | 0.1833 | likely_benign | 0.2313 | benign | -0.351 | Destabilizing | 0.086 | N | 0.313 | neutral | None | None | None | None | I |
T/M | 0.1441 | likely_benign | 0.1653 | benign | 0.104 | Stabilizing | 0.998 | D | 0.807 | deleterious | None | None | None | None | I |
T/N | 0.3688 | ambiguous | 0.4059 | ambiguous | -0.667 | Destabilizing | 0.998 | D | 0.729 | prob.delet. | N | 0.482083661 | None | None | I |
T/P | 0.7545 | likely_pathogenic | 0.7408 | pathogenic | -0.49 | Destabilizing | 0.998 | D | 0.809 | deleterious | D | 0.526801321 | None | None | I |
T/Q | 0.6033 | likely_pathogenic | 0.6345 | pathogenic | -0.945 | Destabilizing | 0.998 | D | 0.821 | deleterious | None | None | None | None | I |
T/R | 0.5794 | likely_pathogenic | 0.6064 | pathogenic | -0.41 | Destabilizing | 0.995 | D | 0.807 | deleterious | None | None | None | None | I |
T/S | 0.2527 | likely_benign | 0.2578 | benign | -0.93 | Destabilizing | 0.979 | D | 0.453 | neutral | N | 0.469700171 | None | None | I |
T/V | 0.1689 | likely_benign | 0.2171 | benign | -0.49 | Destabilizing | 0.938 | D | 0.457 | neutral | None | None | None | None | I |
T/W | 0.9007 | likely_pathogenic | 0.9132 | pathogenic | -0.966 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
T/Y | 0.7254 | likely_pathogenic | 0.76 | pathogenic | -0.727 | Destabilizing | 0.995 | D | 0.843 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.