Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25048 | 75367;75368;75369 | chr2:178570990;178570989;178570988 | chr2:179435717;179435716;179435715 |
N2AB | 23407 | 70444;70445;70446 | chr2:178570990;178570989;178570988 | chr2:179435717;179435716;179435715 |
N2A | 22480 | 67663;67664;67665 | chr2:178570990;178570989;178570988 | chr2:179435717;179435716;179435715 |
N2B | 15983 | 48172;48173;48174 | chr2:178570990;178570989;178570988 | chr2:179435717;179435716;179435715 |
Novex-1 | 16108 | 48547;48548;48549 | chr2:178570990;178570989;178570988 | chr2:179435717;179435716;179435715 |
Novex-2 | 16175 | 48748;48749;48750 | chr2:178570990;178570989;178570988 | chr2:179435717;179435716;179435715 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | rs774327169 | -1.767 | 0.997 | N | 0.656 | 0.444 | 0.683575195277 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
L/S | rs774327169 | -1.767 | 0.997 | N | 0.656 | 0.444 | 0.683575195277 | gnomAD-4.0.0 | 6.15904E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.09671E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6306 | likely_pathogenic | 0.61 | pathogenic | -2.021 | Highly Destabilizing | 0.992 | D | 0.527 | neutral | None | None | None | None | N |
L/C | 0.7618 | likely_pathogenic | 0.7178 | pathogenic | -1.076 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
L/D | 0.9194 | likely_pathogenic | 0.9176 | pathogenic | -1.745 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
L/E | 0.7642 | likely_pathogenic | 0.7561 | pathogenic | -1.708 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
L/F | 0.3529 | ambiguous | 0.3361 | benign | -1.348 | Destabilizing | 0.998 | D | 0.591 | neutral | N | 0.472636232 | None | None | N |
L/G | 0.8086 | likely_pathogenic | 0.8046 | pathogenic | -2.376 | Highly Destabilizing | 0.269 | N | 0.511 | neutral | None | None | None | None | N |
L/H | 0.5894 | likely_pathogenic | 0.571 | pathogenic | -1.584 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
L/I | 0.1429 | likely_benign | 0.1317 | benign | -1.088 | Destabilizing | 0.978 | D | 0.481 | neutral | N | 0.503608137 | None | None | N |
L/K | 0.6804 | likely_pathogenic | 0.6913 | pathogenic | -1.457 | Destabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | N |
L/M | 0.199 | likely_benign | 0.1859 | benign | -0.801 | Destabilizing | 0.999 | D | 0.584 | neutral | None | None | None | None | N |
L/N | 0.6822 | likely_pathogenic | 0.68 | pathogenic | -1.292 | Destabilizing | 0.999 | D | 0.752 | deleterious | None | None | None | None | N |
L/P | 0.8728 | likely_pathogenic | 0.8701 | pathogenic | -1.372 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
L/Q | 0.4905 | ambiguous | 0.4707 | ambiguous | -1.465 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
L/R | 0.6159 | likely_pathogenic | 0.6151 | pathogenic | -0.815 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
L/S | 0.7131 | likely_pathogenic | 0.7015 | pathogenic | -1.882 | Destabilizing | 0.997 | D | 0.656 | neutral | N | 0.4663779 | None | None | N |
L/T | 0.6026 | likely_pathogenic | 0.5843 | pathogenic | -1.742 | Destabilizing | 0.998 | D | 0.553 | neutral | None | None | None | None | N |
L/V | 0.2086 | likely_benign | 0.182 | benign | -1.372 | Destabilizing | 0.543 | D | 0.289 | neutral | N | 0.439826017 | None | None | N |
L/W | 0.5384 | ambiguous | 0.5117 | ambiguous | -1.479 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
L/Y | 0.5766 | likely_pathogenic | 0.5502 | ambiguous | -1.279 | Destabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.