Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2505 | 7738;7739;7740 | chr2:178773543;178773542;178773541 | chr2:179638270;179638269;179638268 |
N2AB | 2505 | 7738;7739;7740 | chr2:178773543;178773542;178773541 | chr2:179638270;179638269;179638268 |
N2A | 2505 | 7738;7739;7740 | chr2:178773543;178773542;178773541 | chr2:179638270;179638269;179638268 |
N2B | 2459 | 7600;7601;7602 | chr2:178773543;178773542;178773541 | chr2:179638270;179638269;179638268 |
Novex-1 | 2459 | 7600;7601;7602 | chr2:178773543;178773542;178773541 | chr2:179638270;179638269;179638268 |
Novex-2 | 2459 | 7600;7601;7602 | chr2:178773543;178773542;178773541 | chr2:179638270;179638269;179638268 |
Novex-3 | 2505 | 7738;7739;7740 | chr2:178773543;178773542;178773541 | chr2:179638270;179638269;179638268 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.801 | N | 0.347 | 0.15 | 0.146414634003 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
N/Y | None | None | 0.989 | N | 0.511 | 0.412 | 0.620613072855 | gnomAD-4.0.0 | 1.59068E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85677E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2396 | likely_benign | 0.2049 | benign | -0.739 | Destabilizing | 0.525 | D | 0.404 | neutral | None | None | None | None | N |
N/C | 0.2752 | likely_benign | 0.2467 | benign | -0.053 | Destabilizing | 0.998 | D | 0.512 | neutral | None | None | None | None | N |
N/D | 0.2667 | likely_benign | 0.2192 | benign | -0.816 | Destabilizing | 0.801 | D | 0.397 | neutral | N | 0.497897518 | None | None | N |
N/E | 0.514 | ambiguous | 0.4235 | ambiguous | -0.732 | Destabilizing | 0.842 | D | 0.349 | neutral | None | None | None | None | N |
N/F | 0.4875 | ambiguous | 0.437 | ambiguous | -0.469 | Destabilizing | 0.974 | D | 0.555 | neutral | None | None | None | None | N |
N/G | 0.2567 | likely_benign | 0.2328 | benign | -1.069 | Destabilizing | 0.525 | D | 0.342 | neutral | None | None | None | None | N |
N/H | 0.1029 | likely_benign | 0.097 | benign | -0.826 | Destabilizing | 0.989 | D | 0.399 | neutral | N | 0.501629175 | None | None | N |
N/I | 0.2547 | likely_benign | 0.215 | benign | 0.093 | Stabilizing | 0.934 | D | 0.508 | neutral | N | 0.513893785 | None | None | N |
N/K | 0.3514 | ambiguous | 0.2864 | benign | -0.401 | Destabilizing | 0.801 | D | 0.347 | neutral | N | 0.456279196 | None | None | N |
N/L | 0.2155 | likely_benign | 0.1855 | benign | 0.093 | Stabilizing | 0.728 | D | 0.46 | neutral | None | None | None | None | N |
N/M | 0.3422 | ambiguous | 0.2993 | benign | 0.519 | Stabilizing | 0.998 | D | 0.479 | neutral | None | None | None | None | N |
N/P | 0.4928 | ambiguous | 0.4561 | ambiguous | -0.155 | Destabilizing | 0.974 | D | 0.461 | neutral | None | None | None | None | N |
N/Q | 0.3435 | ambiguous | 0.2989 | benign | -1.028 | Destabilizing | 0.974 | D | 0.367 | neutral | None | None | None | None | N |
N/R | 0.3704 | ambiguous | 0.316 | benign | -0.371 | Destabilizing | 0.842 | D | 0.365 | neutral | None | None | None | None | N |
N/S | 0.0775 | likely_benign | 0.0713 | benign | -0.958 | Destabilizing | 0.022 | N | 0.09 | neutral | N | 0.442612209 | None | None | N |
N/T | 0.106 | likely_benign | 0.0934 | benign | -0.699 | Destabilizing | 0.022 | N | 0.079 | neutral | N | 0.444137673 | None | None | N |
N/V | 0.2906 | likely_benign | 0.2403 | benign | -0.155 | Destabilizing | 0.728 | D | 0.475 | neutral | None | None | None | None | N |
N/W | 0.7456 | likely_pathogenic | 0.7076 | pathogenic | -0.254 | Destabilizing | 0.998 | D | 0.596 | neutral | None | None | None | None | N |
N/Y | 0.161 | likely_benign | 0.1418 | benign | -0.048 | Destabilizing | 0.989 | D | 0.511 | neutral | N | 0.510760964 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.