Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25050 | 75373;75374;75375 | chr2:178570984;178570983;178570982 | chr2:179435711;179435710;179435709 |
N2AB | 23409 | 70450;70451;70452 | chr2:178570984;178570983;178570982 | chr2:179435711;179435710;179435709 |
N2A | 22482 | 67669;67670;67671 | chr2:178570984;178570983;178570982 | chr2:179435711;179435710;179435709 |
N2B | 15985 | 48178;48179;48180 | chr2:178570984;178570983;178570982 | chr2:179435711;179435710;179435709 |
Novex-1 | 16110 | 48553;48554;48555 | chr2:178570984;178570983;178570982 | chr2:179435711;179435710;179435709 |
Novex-2 | 16177 | 48754;48755;48756 | chr2:178570984;178570983;178570982 | chr2:179435711;179435710;179435709 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs770754919 | -0.096 | 0.012 | N | 0.258 | 0.077 | 0.191931220699 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs770754919 | -0.096 | 0.012 | N | 0.258 | 0.077 | 0.191931220699 | gnomAD-4.0.0 | 3.18384E-06 | None | None | None | None | N | None | 0 | 4.57289E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1232 | likely_benign | 0.1316 | benign | -0.002 | Destabilizing | 0.012 | N | 0.281 | neutral | N | 0.47134379 | None | None | N |
E/C | 0.7306 | likely_pathogenic | 0.7348 | pathogenic | -0.324 | Destabilizing | 0.864 | D | 0.289 | neutral | None | None | None | None | N |
E/D | 0.0634 | likely_benign | 0.0643 | benign | -0.487 | Destabilizing | None | N | 0.087 | neutral | N | 0.412756846 | None | None | N |
E/F | 0.6429 | likely_pathogenic | 0.6363 | pathogenic | -0.108 | Destabilizing | 0.628 | D | 0.295 | neutral | None | None | None | None | N |
E/G | 0.1128 | likely_benign | 0.1195 | benign | -0.084 | Destabilizing | 0.024 | N | 0.219 | neutral | N | 0.444925193 | None | None | N |
E/H | 0.3568 | ambiguous | 0.3634 | ambiguous | 0.574 | Stabilizing | 0.356 | N | 0.197 | neutral | None | None | None | None | N |
E/I | 0.3791 | ambiguous | 0.3772 | ambiguous | 0.153 | Stabilizing | 0.356 | N | 0.334 | neutral | None | None | None | None | N |
E/K | 0.1714 | likely_benign | 0.1698 | benign | 0.293 | Stabilizing | 0.012 | N | 0.258 | neutral | N | 0.489966836 | None | None | N |
E/L | 0.3379 | likely_benign | 0.3421 | ambiguous | 0.153 | Stabilizing | 0.072 | N | 0.264 | neutral | None | None | None | None | N |
E/M | 0.4146 | ambiguous | 0.4271 | ambiguous | -0.12 | Destabilizing | 0.356 | N | 0.263 | neutral | None | None | None | None | N |
E/N | 0.1255 | likely_benign | 0.1359 | benign | 0.088 | Stabilizing | None | N | 0.081 | neutral | None | None | None | None | N |
E/P | 0.5848 | likely_pathogenic | 0.5531 | ambiguous | 0.118 | Stabilizing | 0.136 | N | 0.295 | neutral | None | None | None | None | N |
E/Q | 0.15 | likely_benign | 0.1522 | benign | 0.077 | Stabilizing | 0.001 | N | 0.186 | neutral | N | 0.505187004 | None | None | N |
E/R | 0.2684 | likely_benign | 0.2605 | benign | 0.526 | Stabilizing | 0.038 | N | 0.15 | neutral | None | None | None | None | N |
E/S | 0.1183 | likely_benign | 0.1267 | benign | -0.04 | Destabilizing | 0.001 | N | 0.103 | neutral | None | None | None | None | N |
E/T | 0.174 | likely_benign | 0.187 | benign | 0.038 | Stabilizing | 0.016 | N | 0.249 | neutral | None | None | None | None | N |
E/V | 0.2244 | likely_benign | 0.2293 | benign | 0.118 | Stabilizing | 0.055 | N | 0.255 | neutral | N | 0.513691844 | None | None | N |
E/W | 0.8274 | likely_pathogenic | 0.8118 | pathogenic | -0.095 | Destabilizing | 0.864 | D | 0.324 | neutral | None | None | None | None | N |
E/Y | 0.5002 | ambiguous | 0.4946 | ambiguous | 0.102 | Stabilizing | 0.628 | D | 0.273 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.