Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2507 | 7744;7745;7746 | chr2:178773537;178773536;178773535 | chr2:179638264;179638263;179638262 |
N2AB | 2507 | 7744;7745;7746 | chr2:178773537;178773536;178773535 | chr2:179638264;179638263;179638262 |
N2A | 2507 | 7744;7745;7746 | chr2:178773537;178773536;178773535 | chr2:179638264;179638263;179638262 |
N2B | 2461 | 7606;7607;7608 | chr2:178773537;178773536;178773535 | chr2:179638264;179638263;179638262 |
Novex-1 | 2461 | 7606;7607;7608 | chr2:178773537;178773536;178773535 | chr2:179638264;179638263;179638262 |
Novex-2 | 2461 | 7606;7607;7608 | chr2:178773537;178773536;178773535 | chr2:179638264;179638263;179638262 |
Novex-3 | 2507 | 7744;7745;7746 | chr2:178773537;178773536;178773535 | chr2:179638264;179638263;179638262 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1280887940 | None | 0.999 | N | 0.772 | 0.478 | 0.5632085275 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1358 | likely_benign | 0.1232 | benign | -0.787 | Destabilizing | 0.962 | D | 0.513 | neutral | N | 0.439394171 | None | None | N |
T/C | 0.4722 | ambiguous | 0.4262 | ambiguous | -1.188 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
T/D | 0.9755 | likely_pathogenic | 0.9651 | pathogenic | -2.614 | Highly Destabilizing | 0.998 | D | 0.727 | prob.delet. | None | None | None | None | N |
T/E | 0.9713 | likely_pathogenic | 0.9596 | pathogenic | -2.452 | Highly Destabilizing | 0.998 | D | 0.719 | prob.delet. | None | None | None | None | N |
T/F | 0.903 | likely_pathogenic | 0.878 | pathogenic | -0.649 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
T/G | 0.6388 | likely_pathogenic | 0.5877 | pathogenic | -1.108 | Destabilizing | 0.994 | D | 0.655 | neutral | None | None | None | None | N |
T/H | 0.9474 | likely_pathogenic | 0.9311 | pathogenic | -1.315 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
T/I | 0.509 | ambiguous | 0.4626 | ambiguous | 0.02 | Stabilizing | 0.999 | D | 0.772 | deleterious | N | 0.488019119 | None | None | N |
T/K | 0.9635 | likely_pathogenic | 0.9525 | pathogenic | -0.818 | Destabilizing | 0.998 | D | 0.724 | prob.delet. | None | None | None | None | N |
T/L | 0.361 | ambiguous | 0.3022 | benign | 0.02 | Stabilizing | 0.997 | D | 0.647 | neutral | None | None | None | None | N |
T/M | 0.3096 | likely_benign | 0.2447 | benign | -0.077 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
T/N | 0.6982 | likely_pathogenic | 0.6322 | pathogenic | -1.679 | Destabilizing | 0.998 | D | 0.741 | deleterious | D | 0.633121632 | None | None | N |
T/P | 0.5428 | ambiguous | 0.4979 | ambiguous | -0.22 | Destabilizing | 0.999 | D | 0.775 | deleterious | D | 0.538121633 | None | None | N |
T/Q | 0.9346 | likely_pathogenic | 0.9143 | pathogenic | -1.552 | Destabilizing | 0.999 | D | 0.776 | deleterious | None | None | None | None | N |
T/R | 0.9439 | likely_pathogenic | 0.9291 | pathogenic | -0.86 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
T/S | 0.247 | likely_benign | 0.2186 | benign | -1.593 | Destabilizing | 0.825 | D | 0.384 | neutral | N | 0.510001315 | None | None | N |
T/V | 0.2829 | likely_benign | 0.2573 | benign | -0.22 | Destabilizing | 0.997 | D | 0.606 | neutral | None | None | None | None | N |
T/W | 0.9906 | likely_pathogenic | 0.9872 | pathogenic | -1.002 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
T/Y | 0.9552 | likely_pathogenic | 0.94 | pathogenic | -0.54 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.