Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25077 | 75454;75455;75456 | chr2:178570903;178570902;178570901 | chr2:179435630;179435629;179435628 |
N2AB | 23436 | 70531;70532;70533 | chr2:178570903;178570902;178570901 | chr2:179435630;179435629;179435628 |
N2A | 22509 | 67750;67751;67752 | chr2:178570903;178570902;178570901 | chr2:179435630;179435629;179435628 |
N2B | 16012 | 48259;48260;48261 | chr2:178570903;178570902;178570901 | chr2:179435630;179435629;179435628 |
Novex-1 | 16137 | 48634;48635;48636 | chr2:178570903;178570902;178570901 | chr2:179435630;179435629;179435628 |
Novex-2 | 16204 | 48835;48836;48837 | chr2:178570903;178570902;178570901 | chr2:179435630;179435629;179435628 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1001172074 | None | 1.0 | D | 0.87 | 0.862 | 0.922390740026 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Y/C | rs1001172074 | None | 1.0 | D | 0.87 | 0.862 | 0.922390740026 | gnomAD-4.0.0 | 1.05365E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.44114E-05 | 0 | 0 |
Y/H | None | None | 1.0 | D | 0.849 | 0.831 | 0.830002795327 | gnomAD-4.0.0 | 1.59174E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77485E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9886 | likely_pathogenic | 0.988 | pathogenic | -3.498 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
Y/C | 0.7746 | likely_pathogenic | 0.7809 | pathogenic | -1.89 | Destabilizing | 1.0 | D | 0.87 | deleterious | D | 0.65575571 | None | None | N |
Y/D | 0.9907 | likely_pathogenic | 0.9873 | pathogenic | -3.975 | Highly Destabilizing | 1.0 | D | 0.872 | deleterious | D | 0.688026597 | None | None | N |
Y/E | 0.9968 | likely_pathogenic | 0.996 | pathogenic | -3.762 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
Y/F | 0.2564 | likely_benign | 0.2524 | benign | -1.559 | Destabilizing | 0.999 | D | 0.742 | deleterious | D | 0.620275597 | None | None | N |
Y/G | 0.9734 | likely_pathogenic | 0.9677 | pathogenic | -3.892 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
Y/H | 0.9435 | likely_pathogenic | 0.9276 | pathogenic | -2.671 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | D | 0.671775071 | None | None | N |
Y/I | 0.954 | likely_pathogenic | 0.9556 | pathogenic | -2.155 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
Y/K | 0.9971 | likely_pathogenic | 0.9964 | pathogenic | -2.697 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
Y/L | 0.9312 | likely_pathogenic | 0.9307 | pathogenic | -2.155 | Highly Destabilizing | 0.999 | D | 0.814 | deleterious | None | None | None | None | N |
Y/M | 0.9641 | likely_pathogenic | 0.9648 | pathogenic | -1.77 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
Y/N | 0.9483 | likely_pathogenic | 0.9324 | pathogenic | -3.539 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | D | 0.687824793 | None | None | N |
Y/P | 0.9985 | likely_pathogenic | 0.998 | pathogenic | -2.622 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Y/Q | 0.9936 | likely_pathogenic | 0.9926 | pathogenic | -3.26 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
Y/R | 0.9904 | likely_pathogenic | 0.9893 | pathogenic | -2.467 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
Y/S | 0.9643 | likely_pathogenic | 0.9561 | pathogenic | -3.777 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | D | 0.688026597 | None | None | N |
Y/T | 0.9865 | likely_pathogenic | 0.9848 | pathogenic | -3.451 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
Y/V | 0.9054 | likely_pathogenic | 0.9081 | pathogenic | -2.622 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
Y/W | 0.7671 | likely_pathogenic | 0.7525 | pathogenic | -0.865 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.