Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25086 | 75481;75482;75483 | chr2:178570876;178570875;178570874 | chr2:179435603;179435602;179435601 |
N2AB | 23445 | 70558;70559;70560 | chr2:178570876;178570875;178570874 | chr2:179435603;179435602;179435601 |
N2A | 22518 | 67777;67778;67779 | chr2:178570876;178570875;178570874 | chr2:179435603;179435602;179435601 |
N2B | 16021 | 48286;48287;48288 | chr2:178570876;178570875;178570874 | chr2:179435603;179435602;179435601 |
Novex-1 | 16146 | 48661;48662;48663 | chr2:178570876;178570875;178570874 | chr2:179435603;179435602;179435601 |
Novex-2 | 16213 | 48862;48863;48864 | chr2:178570876;178570875;178570874 | chr2:179435603;179435602;179435601 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1707949011 | None | 0.014 | N | 0.304 | 0.312 | 0.284150004643 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8097 | likely_pathogenic | 0.8002 | pathogenic | -0.796 | Destabilizing | 0.998 | D | 0.358 | neutral | None | None | None | None | I |
A/D | 0.9007 | likely_pathogenic | 0.8913 | pathogenic | -0.925 | Destabilizing | 0.942 | D | 0.608 | neutral | N | 0.492564424 | None | None | I |
A/E | 0.8078 | likely_pathogenic | 0.7967 | pathogenic | -1.072 | Destabilizing | 0.956 | D | 0.449 | neutral | None | None | None | None | I |
A/F | 0.7735 | likely_pathogenic | 0.7555 | pathogenic | -1.222 | Destabilizing | 0.956 | D | 0.614 | neutral | None | None | None | None | I |
A/G | 0.3452 | ambiguous | 0.31 | benign | -0.614 | Destabilizing | 0.822 | D | 0.391 | neutral | N | 0.460258607 | None | None | I |
A/H | 0.907 | likely_pathogenic | 0.9005 | pathogenic | -0.615 | Destabilizing | 0.998 | D | 0.622 | neutral | None | None | None | None | I |
A/I | 0.5712 | likely_pathogenic | 0.5453 | ambiguous | -0.534 | Destabilizing | 0.043 | N | 0.344 | neutral | None | None | None | None | I |
A/K | 0.9366 | likely_pathogenic | 0.932 | pathogenic | -0.666 | Destabilizing | 0.956 | D | 0.453 | neutral | None | None | None | None | I |
A/L | 0.4759 | ambiguous | 0.4573 | ambiguous | -0.534 | Destabilizing | 0.303 | N | 0.486 | neutral | None | None | None | None | I |
A/M | 0.4904 | ambiguous | 0.469 | ambiguous | -0.306 | Destabilizing | 0.988 | D | 0.477 | neutral | None | None | None | None | I |
A/N | 0.7496 | likely_pathogenic | 0.7209 | pathogenic | -0.385 | Destabilizing | 0.956 | D | 0.619 | neutral | None | None | None | None | I |
A/P | 0.9517 | likely_pathogenic | 0.9412 | pathogenic | -0.503 | Destabilizing | 0.99 | D | 0.483 | neutral | N | 0.472244612 | None | None | I |
A/Q | 0.8015 | likely_pathogenic | 0.78 | pathogenic | -0.752 | Destabilizing | 0.978 | D | 0.484 | neutral | None | None | None | None | I |
A/R | 0.8811 | likely_pathogenic | 0.872 | pathogenic | -0.16 | Destabilizing | 0.978 | D | 0.48 | neutral | None | None | None | None | I |
A/S | 0.1649 | likely_benign | 0.1595 | benign | -0.594 | Destabilizing | 0.294 | N | 0.237 | neutral | N | 0.501183907 | None | None | I |
A/T | 0.2438 | likely_benign | 0.2201 | benign | -0.674 | Destabilizing | 0.822 | D | 0.407 | neutral | N | 0.472089573 | None | None | I |
A/V | 0.3253 | likely_benign | 0.3088 | benign | -0.503 | Destabilizing | 0.014 | N | 0.304 | neutral | N | 0.474433431 | None | None | I |
A/W | 0.9729 | likely_pathogenic | 0.968 | pathogenic | -1.331 | Destabilizing | 0.998 | D | 0.697 | prob.neutral | None | None | None | None | I |
A/Y | 0.8844 | likely_pathogenic | 0.8774 | pathogenic | -0.966 | Destabilizing | 0.978 | D | 0.623 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.