Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25096 | 75511;75512;75513 | chr2:178570846;178570845;178570844 | chr2:179435573;179435572;179435571 |
N2AB | 23455 | 70588;70589;70590 | chr2:178570846;178570845;178570844 | chr2:179435573;179435572;179435571 |
N2A | 22528 | 67807;67808;67809 | chr2:178570846;178570845;178570844 | chr2:179435573;179435572;179435571 |
N2B | 16031 | 48316;48317;48318 | chr2:178570846;178570845;178570844 | chr2:179435573;179435572;179435571 |
Novex-1 | 16156 | 48691;48692;48693 | chr2:178570846;178570845;178570844 | chr2:179435573;179435572;179435571 |
Novex-2 | 16223 | 48892;48893;48894 | chr2:178570846;178570845;178570844 | chr2:179435573;179435572;179435571 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 1.0 | N | 0.848 | 0.269 | 0.250039746154 | gnomAD-4.0.0 | 1.59171E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85919E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1489 | likely_benign | 0.1293 | benign | -1.052 | Destabilizing | 0.995 | D | 0.519 | neutral | None | None | None | None | N |
S/C | 0.2038 | likely_benign | 0.1781 | benign | -0.767 | Destabilizing | 1.0 | D | 0.848 | deleterious | N | 0.460501053 | None | None | N |
S/D | 0.6953 | likely_pathogenic | 0.6559 | pathogenic | -0.406 | Destabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | N |
S/E | 0.8144 | likely_pathogenic | 0.7769 | pathogenic | -0.382 | Destabilizing | 0.998 | D | 0.784 | deleterious | None | None | None | None | N |
S/F | 0.683 | likely_pathogenic | 0.6085 | pathogenic | -1.167 | Destabilizing | 0.999 | D | 0.882 | deleterious | None | None | None | None | N |
S/G | 0.1604 | likely_benign | 0.133 | benign | -1.311 | Destabilizing | 0.997 | D | 0.663 | prob.neutral | N | 0.484681694 | None | None | N |
S/H | 0.7095 | likely_pathogenic | 0.6606 | pathogenic | -1.639 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
S/I | 0.3787 | ambiguous | 0.3124 | benign | -0.453 | Destabilizing | 0.999 | D | 0.829 | deleterious | N | 0.465267887 | None | None | N |
S/K | 0.9157 | likely_pathogenic | 0.8834 | pathogenic | -0.678 | Destabilizing | 0.998 | D | 0.781 | deleterious | None | None | None | None | N |
S/L | 0.298 | likely_benign | 0.2472 | benign | -0.453 | Destabilizing | 0.999 | D | 0.788 | deleterious | None | None | None | None | N |
S/M | 0.4051 | ambiguous | 0.3636 | ambiguous | -0.193 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
S/N | 0.2529 | likely_benign | 0.2291 | benign | -0.709 | Destabilizing | 0.997 | D | 0.769 | deleterious | N | 0.455474623 | None | None | N |
S/P | 0.1807 | likely_benign | 0.1516 | benign | -0.621 | Destabilizing | 0.999 | D | 0.844 | deleterious | None | None | None | None | N |
S/Q | 0.8177 | likely_pathogenic | 0.7723 | pathogenic | -0.876 | Destabilizing | 0.999 | D | 0.842 | deleterious | None | None | None | None | N |
S/R | 0.9176 | likely_pathogenic | 0.8789 | pathogenic | -0.565 | Destabilizing | 0.999 | D | 0.839 | deleterious | N | 0.484174715 | None | None | N |
S/T | 0.131 | likely_benign | 0.1153 | benign | -0.763 | Destabilizing | 0.997 | D | 0.669 | prob.neutral | N | 0.456763047 | None | None | N |
S/V | 0.3579 | ambiguous | 0.3031 | benign | -0.621 | Destabilizing | 0.999 | D | 0.818 | deleterious | None | None | None | None | N |
S/W | 0.7953 | likely_pathogenic | 0.7317 | pathogenic | -1.07 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
S/Y | 0.5871 | likely_pathogenic | 0.5084 | ambiguous | -0.821 | Destabilizing | 0.999 | D | 0.889 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.