Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25100 | 75523;75524;75525 | chr2:178570834;178570833;178570832 | chr2:179435561;179435560;179435559 |
N2AB | 23459 | 70600;70601;70602 | chr2:178570834;178570833;178570832 | chr2:179435561;179435560;179435559 |
N2A | 22532 | 67819;67820;67821 | chr2:178570834;178570833;178570832 | chr2:179435561;179435560;179435559 |
N2B | 16035 | 48328;48329;48330 | chr2:178570834;178570833;178570832 | chr2:179435561;179435560;179435559 |
Novex-1 | 16160 | 48703;48704;48705 | chr2:178570834;178570833;178570832 | chr2:179435561;179435560;179435559 |
Novex-2 | 16227 | 48904;48905;48906 | chr2:178570834;178570833;178570832 | chr2:179435561;179435560;179435559 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1314990516 | -0.919 | 0.003 | N | 0.136 | 0.128 | 0.151104730317 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
I/V | rs1314990516 | -0.919 | 0.003 | N | 0.136 | 0.128 | 0.151104730317 | gnomAD-4.0.0 | 2.05288E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69869E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9038 | likely_pathogenic | 0.868 | pathogenic | -2.244 | Highly Destabilizing | 0.587 | D | 0.653 | prob.neutral | None | None | None | None | N |
I/C | 0.9352 | likely_pathogenic | 0.9189 | pathogenic | -1.514 | Destabilizing | 0.996 | D | 0.729 | deleterious | None | None | None | None | N |
I/D | 0.9949 | likely_pathogenic | 0.993 | pathogenic | -1.907 | Destabilizing | 0.984 | D | 0.84 | deleterious | None | None | None | None | N |
I/E | 0.9755 | likely_pathogenic | 0.9676 | pathogenic | -1.746 | Destabilizing | 0.953 | D | 0.823 | deleterious | None | None | None | None | N |
I/F | 0.5367 | ambiguous | 0.4652 | ambiguous | -1.325 | Destabilizing | 0.02 | N | 0.271 | neutral | None | None | None | None | N |
I/G | 0.9875 | likely_pathogenic | 0.982 | pathogenic | -2.737 | Highly Destabilizing | 0.953 | D | 0.792 | deleterious | None | None | None | None | N |
I/H | 0.9656 | likely_pathogenic | 0.9551 | pathogenic | -1.92 | Destabilizing | 0.996 | D | 0.829 | deleterious | None | None | None | None | N |
I/K | 0.9297 | likely_pathogenic | 0.914 | pathogenic | -1.665 | Destabilizing | 0.938 | D | 0.828 | deleterious | N | 0.497212861 | None | None | N |
I/L | 0.2931 | likely_benign | 0.2507 | benign | -0.866 | Destabilizing | 0.162 | N | 0.389 | neutral | N | 0.45673839 | None | None | N |
I/M | 0.28 | likely_benign | 0.243 | benign | -0.747 | Destabilizing | 0.938 | D | 0.622 | neutral | N | 0.481390012 | None | None | N |
I/N | 0.9363 | likely_pathogenic | 0.9234 | pathogenic | -1.811 | Destabilizing | 0.984 | D | 0.841 | deleterious | None | None | None | None | N |
I/P | 0.9955 | likely_pathogenic | 0.9926 | pathogenic | -1.3 | Destabilizing | 0.984 | D | 0.845 | deleterious | None | None | None | None | N |
I/Q | 0.9463 | likely_pathogenic | 0.9347 | pathogenic | -1.768 | Destabilizing | 0.984 | D | 0.819 | deleterious | None | None | None | None | N |
I/R | 0.9105 | likely_pathogenic | 0.891 | pathogenic | -1.256 | Destabilizing | 0.938 | D | 0.836 | deleterious | N | 0.496705882 | None | None | N |
I/S | 0.931 | likely_pathogenic | 0.9152 | pathogenic | -2.562 | Highly Destabilizing | 0.953 | D | 0.759 | deleterious | None | None | None | None | N |
I/T | 0.8106 | likely_pathogenic | 0.7769 | pathogenic | -2.252 | Highly Destabilizing | 0.682 | D | 0.729 | deleterious | N | 0.494424476 | None | None | N |
I/V | 0.0842 | likely_benign | 0.0761 | benign | -1.3 | Destabilizing | 0.003 | N | 0.136 | neutral | N | 0.429808519 | None | None | N |
I/W | 0.9781 | likely_pathogenic | 0.9702 | pathogenic | -1.549 | Destabilizing | 0.996 | D | 0.832 | deleterious | None | None | None | None | N |
I/Y | 0.9065 | likely_pathogenic | 0.8899 | pathogenic | -1.282 | Destabilizing | 0.833 | D | 0.738 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.