Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2512 | 7759;7760;7761 | chr2:178773522;178773521;178773520 | chr2:179638249;179638248;179638247 |
N2AB | 2512 | 7759;7760;7761 | chr2:178773522;178773521;178773520 | chr2:179638249;179638248;179638247 |
N2A | 2512 | 7759;7760;7761 | chr2:178773522;178773521;178773520 | chr2:179638249;179638248;179638247 |
N2B | 2466 | 7621;7622;7623 | chr2:178773522;178773521;178773520 | chr2:179638249;179638248;179638247 |
Novex-1 | 2466 | 7621;7622;7623 | chr2:178773522;178773521;178773520 | chr2:179638249;179638248;179638247 |
Novex-2 | 2466 | 7621;7622;7623 | chr2:178773522;178773521;178773520 | chr2:179638249;179638248;179638247 |
Novex-3 | 2512 | 7759;7760;7761 | chr2:178773522;178773521;178773520 | chr2:179638249;179638248;179638247 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs116049561 | 0.225 | 0.96 | D | 0.596 | 0.422 | None | gnomAD-2.1.1 | 2.12E-05 | None | None | None | None | N | None | 4.01E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.88E-05 | 0 |
E/K | rs116049561 | 0.225 | 0.96 | D | 0.596 | 0.422 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/K | rs116049561 | 0.225 | 0.96 | D | 0.596 | 0.422 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
E/K | rs116049561 | 0.225 | 0.96 | D | 0.596 | 0.422 | None | gnomAD-4.0.0 | 4.39899E-05 | None | None | None | None | N | None | 2.66638E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 5.59333E-05 | 0 | 4.8E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1354 | likely_benign | 0.1414 | benign | -0.593 | Destabilizing | 0.026 | N | 0.318 | neutral | N | 0.481602594 | None | None | N |
E/C | 0.8535 | likely_pathogenic | 0.8633 | pathogenic | -0.052 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/D | 0.2695 | likely_benign | 0.3035 | benign | -0.544 | Destabilizing | 0.896 | D | 0.567 | neutral | N | 0.516844787 | None | None | N |
E/F | 0.8586 | likely_pathogenic | 0.8626 | pathogenic | -0.354 | Destabilizing | 0.988 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/G | 0.1947 | likely_benign | 0.2053 | benign | -0.843 | Destabilizing | 0.026 | N | 0.34 | neutral | N | 0.51796114 | None | None | N |
E/H | 0.6087 | likely_pathogenic | 0.6375 | pathogenic | -0.314 | Destabilizing | 0.988 | D | 0.57 | neutral | None | None | None | None | N |
E/I | 0.5694 | likely_pathogenic | 0.5774 | pathogenic | 0.05 | Stabilizing | 0.976 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/K | 0.1613 | likely_benign | 0.1676 | benign | 0.251 | Stabilizing | 0.96 | D | 0.596 | neutral | D | 0.602166284 | None | None | N |
E/L | 0.6341 | likely_pathogenic | 0.6549 | pathogenic | 0.05 | Stabilizing | 0.976 | D | 0.65 | neutral | None | None | None | None | N |
E/M | 0.5612 | ambiguous | 0.5697 | pathogenic | 0.304 | Stabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/N | 0.3913 | ambiguous | 0.4224 | ambiguous | -0.184 | Destabilizing | 0.988 | D | 0.587 | neutral | None | None | None | None | N |
E/P | 0.9511 | likely_pathogenic | 0.9634 | pathogenic | -0.144 | Destabilizing | 0.988 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/Q | 0.1507 | likely_benign | 0.1557 | benign | -0.137 | Destabilizing | 0.663 | D | 0.221 | neutral | N | 0.514609972 | None | None | N |
E/R | 0.27 | likely_benign | 0.2821 | benign | 0.43 | Stabilizing | 0.976 | D | 0.596 | neutral | None | None | None | None | N |
E/S | 0.1993 | likely_benign | 0.2121 | benign | -0.366 | Destabilizing | 0.851 | D | 0.589 | neutral | None | None | None | None | N |
E/T | 0.2805 | likely_benign | 0.2926 | benign | -0.156 | Destabilizing | 0.919 | D | 0.649 | neutral | None | None | None | None | N |
E/V | 0.3573 | ambiguous | 0.3659 | ambiguous | -0.144 | Destabilizing | 0.938 | D | 0.641 | neutral | N | 0.512401891 | None | None | N |
E/W | 0.9616 | likely_pathogenic | 0.9653 | pathogenic | -0.131 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/Y | 0.7851 | likely_pathogenic | 0.8007 | pathogenic | -0.081 | Destabilizing | 0.996 | D | 0.707 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.