Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25123 | 75592;75593;75594 | chr2:178570765;178570764;178570763 | chr2:179435492;179435491;179435490 |
N2AB | 23482 | 70669;70670;70671 | chr2:178570765;178570764;178570763 | chr2:179435492;179435491;179435490 |
N2A | 22555 | 67888;67889;67890 | chr2:178570765;178570764;178570763 | chr2:179435492;179435491;179435490 |
N2B | 16058 | 48397;48398;48399 | chr2:178570765;178570764;178570763 | chr2:179435492;179435491;179435490 |
Novex-1 | 16183 | 48772;48773;48774 | chr2:178570765;178570764;178570763 | chr2:179435492;179435491;179435490 |
Novex-2 | 16250 | 48973;48974;48975 | chr2:178570765;178570764;178570763 | chr2:179435492;179435491;179435490 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1456861699 | None | 0.22 | D | 0.445 | 0.369 | 0.647442735181 | gnomAD-4.0.0 | 2.73714E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59826E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4431 | ambiguous | 0.4802 | ambiguous | -2.021 | Highly Destabilizing | 0.22 | N | 0.445 | neutral | D | 0.535139844 | None | None | N |
V/C | 0.7218 | likely_pathogenic | 0.7597 | pathogenic | -1.38 | Destabilizing | 0.968 | D | 0.533 | neutral | None | None | None | None | N |
V/D | 0.9259 | likely_pathogenic | 0.9474 | pathogenic | -2.43 | Highly Destabilizing | 0.667 | D | 0.662 | neutral | D | 0.562426487 | None | None | N |
V/E | 0.8299 | likely_pathogenic | 0.8734 | pathogenic | -2.306 | Highly Destabilizing | 0.726 | D | 0.614 | neutral | None | None | None | None | N |
V/F | 0.2443 | likely_benign | 0.2994 | benign | -1.322 | Destabilizing | 0.331 | N | 0.581 | neutral | D | 0.529572112 | None | None | N |
V/G | 0.5871 | likely_pathogenic | 0.6324 | pathogenic | -2.474 | Highly Destabilizing | 0.667 | D | 0.653 | neutral | D | 0.550398619 | None | None | N |
V/H | 0.8684 | likely_pathogenic | 0.8973 | pathogenic | -2.181 | Highly Destabilizing | 0.968 | D | 0.624 | neutral | None | None | None | None | N |
V/I | 0.0735 | likely_benign | 0.0728 | benign | -0.802 | Destabilizing | 0.001 | N | 0.299 | neutral | N | 0.494574462 | None | None | N |
V/K | 0.7486 | likely_pathogenic | 0.7969 | pathogenic | -1.861 | Destabilizing | 0.726 | D | 0.607 | neutral | None | None | None | None | N |
V/L | 0.1721 | likely_benign | 0.1879 | benign | -0.802 | Destabilizing | None | N | 0.224 | neutral | N | 0.508932962 | None | None | N |
V/M | 0.2209 | likely_benign | 0.2399 | benign | -0.603 | Destabilizing | 0.396 | N | 0.507 | neutral | None | None | None | None | N |
V/N | 0.8014 | likely_pathogenic | 0.8416 | pathogenic | -1.889 | Destabilizing | 0.89 | D | 0.665 | neutral | None | None | None | None | N |
V/P | 0.9574 | likely_pathogenic | 0.9643 | pathogenic | -1.179 | Destabilizing | 0.89 | D | 0.61 | neutral | None | None | None | None | N |
V/Q | 0.7306 | likely_pathogenic | 0.7819 | pathogenic | -1.888 | Destabilizing | 0.89 | D | 0.617 | neutral | None | None | None | None | N |
V/R | 0.663 | likely_pathogenic | 0.7217 | pathogenic | -1.454 | Destabilizing | 0.726 | D | 0.669 | neutral | None | None | None | None | N |
V/S | 0.632 | likely_pathogenic | 0.6796 | pathogenic | -2.444 | Highly Destabilizing | 0.726 | D | 0.601 | neutral | None | None | None | None | N |
V/T | 0.4435 | ambiguous | 0.4869 | ambiguous | -2.201 | Highly Destabilizing | 0.272 | N | 0.541 | neutral | None | None | None | None | N |
V/W | 0.8924 | likely_pathogenic | 0.9237 | pathogenic | -1.77 | Destabilizing | 0.968 | D | 0.592 | neutral | None | None | None | None | N |
V/Y | 0.703 | likely_pathogenic | 0.7766 | pathogenic | -1.435 | Destabilizing | 0.726 | D | 0.566 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.