Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25124 | 75595;75596;75597 | chr2:178570762;178570761;178570760 | chr2:179435489;179435488;179435487 |
N2AB | 23483 | 70672;70673;70674 | chr2:178570762;178570761;178570760 | chr2:179435489;179435488;179435487 |
N2A | 22556 | 67891;67892;67893 | chr2:178570762;178570761;178570760 | chr2:179435489;179435488;179435487 |
N2B | 16059 | 48400;48401;48402 | chr2:178570762;178570761;178570760 | chr2:179435489;179435488;179435487 |
Novex-1 | 16184 | 48775;48776;48777 | chr2:178570762;178570761;178570760 | chr2:179435489;179435488;179435487 |
Novex-2 | 16251 | 48976;48977;48978 | chr2:178570762;178570761;178570760 | chr2:179435489;179435488;179435487 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/P | None | None | 0.106 | N | 0.525 | 0.285 | 0.380052290102 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2309 | likely_benign | 0.2563 | benign | 0.083 | Stabilizing | 0.016 | N | 0.443 | neutral | None | None | None | None | I |
H/C | 0.1413 | likely_benign | 0.1732 | benign | 0.539 | Stabilizing | 0.864 | D | 0.469 | neutral | None | None | None | None | I |
H/D | 0.2669 | likely_benign | 0.2987 | benign | -0.203 | Destabilizing | 0.012 | N | 0.452 | neutral | N | 0.462388738 | None | None | I |
H/E | 0.3057 | likely_benign | 0.3605 | ambiguous | -0.162 | Destabilizing | 0.016 | N | 0.245 | neutral | None | None | None | None | I |
H/F | 0.2609 | likely_benign | 0.31 | benign | 0.927 | Stabilizing | 0.628 | D | 0.462 | neutral | None | None | None | None | I |
H/G | 0.291 | likely_benign | 0.3269 | benign | -0.216 | Destabilizing | 0.016 | N | 0.452 | neutral | None | None | None | None | I |
H/I | 0.2968 | likely_benign | 0.3323 | benign | 0.86 | Stabilizing | 0.356 | N | 0.516 | neutral | None | None | None | None | I |
H/K | 0.175 | likely_benign | 0.1925 | benign | -0.014 | Destabilizing | 0.016 | N | 0.413 | neutral | None | None | None | None | I |
H/L | 0.0956 | likely_benign | 0.102 | benign | 0.86 | Stabilizing | 0.055 | N | 0.483 | neutral | N | 0.424947857 | None | None | I |
H/M | 0.3546 | ambiguous | 0.389 | ambiguous | 0.594 | Stabilizing | 0.356 | N | 0.487 | neutral | None | None | None | None | I |
H/N | 0.0863 | likely_benign | 0.0873 | benign | -0.096 | Destabilizing | None | N | 0.159 | neutral | N | 0.395510385 | None | None | I |
H/P | 0.1449 | likely_benign | 0.1488 | benign | 0.626 | Stabilizing | 0.106 | N | 0.525 | neutral | N | 0.442880257 | None | None | I |
H/Q | 0.1536 | likely_benign | 0.1686 | benign | 0.048 | Stabilizing | None | N | 0.217 | neutral | N | 0.414306789 | None | None | I |
H/R | 0.0851 | likely_benign | 0.0953 | benign | -0.612 | Destabilizing | None | N | 0.174 | neutral | N | 0.390584567 | None | None | I |
H/S | 0.198 | likely_benign | 0.2154 | benign | 0.021 | Stabilizing | 0.001 | N | 0.206 | neutral | None | None | None | None | I |
H/T | 0.2364 | likely_benign | 0.2726 | benign | 0.163 | Stabilizing | 0.016 | N | 0.499 | neutral | None | None | None | None | I |
H/V | 0.2218 | likely_benign | 0.2497 | benign | 0.626 | Stabilizing | 0.072 | N | 0.494 | neutral | None | None | None | None | I |
H/W | 0.3807 | ambiguous | 0.4485 | ambiguous | 0.982 | Stabilizing | 0.864 | D | 0.484 | neutral | None | None | None | None | I |
H/Y | 0.0914 | likely_benign | 0.1057 | benign | 1.181 | Stabilizing | 0.106 | N | 0.343 | neutral | N | 0.470162859 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.