Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25142 | 75649;75650;75651 | chr2:178570708;178570707;178570706 | chr2:179435435;179435434;179435433 |
N2AB | 23501 | 70726;70727;70728 | chr2:178570708;178570707;178570706 | chr2:179435435;179435434;179435433 |
N2A | 22574 | 67945;67946;67947 | chr2:178570708;178570707;178570706 | chr2:179435435;179435434;179435433 |
N2B | 16077 | 48454;48455;48456 | chr2:178570708;178570707;178570706 | chr2:179435435;179435434;179435433 |
Novex-1 | 16202 | 48829;48830;48831 | chr2:178570708;178570707;178570706 | chr2:179435435;179435434;179435433 |
Novex-2 | 16269 | 49030;49031;49032 | chr2:178570708;178570707;178570706 | chr2:179435435;179435434;179435433 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1707881545 | None | 0.002 | N | 0.159 | 0.098 | 0.176091768786 | gnomAD-4.0.0 | 1.59167E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85933E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0656 | likely_benign | 0.0673 | benign | -0.391 | Destabilizing | 0.002 | N | 0.159 | neutral | N | 0.486871325 | None | None | N |
T/C | 0.2873 | likely_benign | 0.3251 | benign | -0.291 | Destabilizing | 0.977 | D | 0.533 | neutral | None | None | None | None | N |
T/D | 0.2232 | likely_benign | 0.2443 | benign | 0.005 | Stabilizing | 0.005 | N | 0.292 | neutral | None | None | None | None | N |
T/E | 0.1915 | likely_benign | 0.2048 | benign | -0.041 | Destabilizing | 0.25 | N | 0.455 | neutral | None | None | None | None | N |
T/F | 0.1823 | likely_benign | 0.2052 | benign | -0.666 | Destabilizing | 0.92 | D | 0.58 | neutral | None | None | None | None | N |
T/G | 0.1707 | likely_benign | 0.1786 | benign | -0.581 | Destabilizing | 0.25 | N | 0.439 | neutral | None | None | None | None | N |
T/H | 0.188 | likely_benign | 0.2075 | benign | -0.861 | Destabilizing | 0.92 | D | 0.569 | neutral | None | None | None | None | N |
T/I | 0.1168 | likely_benign | 0.1249 | benign | 0.003 | Stabilizing | 0.81 | D | 0.581 | neutral | N | 0.484593601 | None | None | N |
T/K | 0.1712 | likely_benign | 0.1892 | benign | -0.578 | Destabilizing | 0.617 | D | 0.475 | neutral | None | None | None | None | N |
T/L | 0.081 | likely_benign | 0.0879 | benign | 0.003 | Stabilizing | 0.447 | N | 0.469 | neutral | None | None | None | None | N |
T/M | 0.0885 | likely_benign | 0.0922 | benign | 0.089 | Stabilizing | 0.972 | D | 0.552 | neutral | None | None | None | None | N |
T/N | 0.0891 | likely_benign | 0.0926 | benign | -0.372 | Destabilizing | 0.016 | N | 0.226 | neutral | N | 0.495189438 | None | None | N |
T/P | 0.3725 | ambiguous | 0.3972 | ambiguous | -0.097 | Destabilizing | 0.712 | D | 0.569 | neutral | D | 0.535957078 | None | None | N |
T/Q | 0.1763 | likely_benign | 0.1908 | benign | -0.546 | Destabilizing | 0.92 | D | 0.587 | neutral | None | None | None | None | N |
T/R | 0.154 | likely_benign | 0.1786 | benign | -0.311 | Destabilizing | 0.617 | D | 0.569 | neutral | None | None | None | None | N |
T/S | 0.0789 | likely_benign | 0.0822 | benign | -0.567 | Destabilizing | 0.002 | N | 0.149 | neutral | N | 0.479934348 | None | None | N |
T/V | 0.0901 | likely_benign | 0.0954 | benign | -0.097 | Destabilizing | 0.447 | N | 0.378 | neutral | None | None | None | None | N |
T/W | 0.5434 | ambiguous | 0.5936 | pathogenic | -0.684 | Destabilizing | 0.992 | D | 0.584 | neutral | None | None | None | None | N |
T/Y | 0.2152 | likely_benign | 0.242 | benign | -0.425 | Destabilizing | 0.972 | D | 0.581 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.