Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25143 | 75652;75653;75654 | chr2:178570705;178570704;178570703 | chr2:179435432;179435431;179435430 |
N2AB | 23502 | 70729;70730;70731 | chr2:178570705;178570704;178570703 | chr2:179435432;179435431;179435430 |
N2A | 22575 | 67948;67949;67950 | chr2:178570705;178570704;178570703 | chr2:179435432;179435431;179435430 |
N2B | 16078 | 48457;48458;48459 | chr2:178570705;178570704;178570703 | chr2:179435432;179435431;179435430 |
Novex-1 | 16203 | 48832;48833;48834 | chr2:178570705;178570704;178570703 | chr2:179435432;179435431;179435430 |
Novex-2 | 16270 | 49033;49034;49035 | chr2:178570705;178570704;178570703 | chr2:179435432;179435431;179435430 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs988443056 | None | None | N | 0.385 | 0.198 | 0.567207890759 | gnomAD-4.0.0 | 1.59168E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41313E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2532 | likely_benign | 0.2778 | benign | -2.011 | Highly Destabilizing | 0.007 | N | 0.555 | neutral | None | None | None | None | N |
I/C | 0.5424 | ambiguous | 0.5919 | pathogenic | -1.237 | Destabilizing | 0.356 | N | 0.688 | prob.neutral | None | None | None | None | N |
I/D | 0.8526 | likely_pathogenic | 0.8822 | pathogenic | -1.581 | Destabilizing | 0.072 | N | 0.727 | prob.delet. | None | None | None | None | N |
I/E | 0.7687 | likely_pathogenic | 0.8078 | pathogenic | -1.515 | Destabilizing | 0.072 | N | 0.713 | prob.delet. | None | None | None | None | N |
I/F | 0.1758 | likely_benign | 0.1954 | benign | -1.302 | Destabilizing | 0.171 | N | 0.597 | neutral | N | 0.514986576 | None | None | N |
I/G | 0.6358 | likely_pathogenic | 0.6741 | pathogenic | -2.419 | Highly Destabilizing | 0.038 | N | 0.692 | prob.neutral | None | None | None | None | N |
I/H | 0.6128 | likely_pathogenic | 0.6765 | pathogenic | -1.711 | Destabilizing | 0.676 | D | 0.785 | deleterious | None | None | None | None | N |
I/K | 0.5527 | ambiguous | 0.6291 | pathogenic | -1.467 | Destabilizing | 0.038 | N | 0.709 | prob.delet. | None | None | None | None | N |
I/L | 0.1051 | likely_benign | 0.1166 | benign | -0.92 | Destabilizing | 0.005 | N | 0.388 | neutral | N | 0.500134324 | None | None | N |
I/M | 0.1087 | likely_benign | 0.1155 | benign | -0.719 | Destabilizing | 0.005 | N | 0.436 | neutral | N | 0.51583595 | None | None | N |
I/N | 0.405 | ambiguous | 0.4722 | ambiguous | -1.33 | Destabilizing | 0.029 | N | 0.751 | deleterious | D | 0.550741013 | None | None | N |
I/P | 0.7014 | likely_pathogenic | 0.7311 | pathogenic | -1.255 | Destabilizing | 0.356 | N | 0.756 | deleterious | None | None | None | None | N |
I/Q | 0.5823 | likely_pathogenic | 0.635 | pathogenic | -1.425 | Destabilizing | 0.214 | N | 0.758 | deleterious | None | None | None | None | N |
I/R | 0.4516 | ambiguous | 0.5351 | ambiguous | -0.955 | Destabilizing | 0.214 | N | 0.756 | deleterious | None | None | None | None | N |
I/S | 0.2851 | likely_benign | 0.3289 | benign | -1.996 | Destabilizing | 0.001 | N | 0.511 | neutral | N | 0.520862379 | None | None | N |
I/T | 0.1855 | likely_benign | 0.2001 | benign | -1.803 | Destabilizing | None | N | 0.385 | neutral | N | 0.518140128 | None | None | N |
I/V | 0.0691 | likely_benign | 0.0684 | benign | -1.255 | Destabilizing | None | N | 0.181 | neutral | N | 0.434252413 | None | None | N |
I/W | 0.8057 | likely_pathogenic | 0.8411 | pathogenic | -1.462 | Destabilizing | 0.864 | D | 0.776 | deleterious | None | None | None | None | N |
I/Y | 0.5156 | ambiguous | 0.6101 | pathogenic | -1.236 | Destabilizing | 0.356 | N | 0.672 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.