Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25149 | 75670;75671;75672 | chr2:178570687;178570686;178570685 | chr2:179435414;179435413;179435412 |
N2AB | 23508 | 70747;70748;70749 | chr2:178570687;178570686;178570685 | chr2:179435414;179435413;179435412 |
N2A | 22581 | 67966;67967;67968 | chr2:178570687;178570686;178570685 | chr2:179435414;179435413;179435412 |
N2B | 16084 | 48475;48476;48477 | chr2:178570687;178570686;178570685 | chr2:179435414;179435413;179435412 |
Novex-1 | 16209 | 48850;48851;48852 | chr2:178570687;178570686;178570685 | chr2:179435414;179435413;179435412 |
Novex-2 | 16276 | 49051;49052;49053 | chr2:178570687;178570686;178570685 | chr2:179435414;179435413;179435412 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | None | None | 0.317 | N | 0.456 | 0.232 | 0.326616659874 | gnomAD-4.0.0 | 1.59177E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85941E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1142 | likely_benign | 0.1236 | benign | 0.086 | Stabilizing | 0.027 | N | 0.356 | neutral | N | 0.471772134 | None | None | N |
D/C | 0.3522 | ambiguous | 0.4197 | ambiguous | -0.177 | Destabilizing | 0.935 | D | 0.519 | neutral | None | None | None | None | N |
D/E | 0.0932 | likely_benign | 0.1003 | benign | -0.371 | Destabilizing | None | N | 0.194 | neutral | N | 0.487184742 | None | None | N |
D/F | 0.3435 | ambiguous | 0.385 | ambiguous | -0.075 | Destabilizing | 0.791 | D | 0.453 | neutral | None | None | None | None | N |
D/G | 0.0947 | likely_benign | 0.1006 | benign | 0.004 | Stabilizing | None | N | 0.227 | neutral | N | 0.387089531 | None | None | N |
D/H | 0.1551 | likely_benign | 0.1844 | benign | 0.573 | Stabilizing | 0.78 | D | 0.401 | neutral | N | 0.490218784 | None | None | N |
D/I | 0.1745 | likely_benign | 0.1969 | benign | 0.233 | Stabilizing | 0.555 | D | 0.449 | neutral | None | None | None | None | N |
D/K | 0.1669 | likely_benign | 0.19 | benign | 0.395 | Stabilizing | 0.081 | N | 0.403 | neutral | None | None | None | None | N |
D/L | 0.203 | likely_benign | 0.2289 | benign | 0.233 | Stabilizing | 0.38 | N | 0.471 | neutral | None | None | None | None | N |
D/M | 0.336 | likely_benign | 0.3729 | ambiguous | -0.004 | Destabilizing | 0.935 | D | 0.459 | neutral | None | None | None | None | N |
D/N | 0.071 | likely_benign | 0.074 | benign | 0.227 | Stabilizing | 0.117 | N | 0.443 | neutral | N | 0.500036609 | None | None | N |
D/P | 0.3672 | ambiguous | 0.3796 | ambiguous | 0.201 | Stabilizing | 0.555 | D | 0.425 | neutral | None | None | None | None | N |
D/Q | 0.1614 | likely_benign | 0.1854 | benign | 0.21 | Stabilizing | 0.235 | N | 0.409 | neutral | None | None | None | None | N |
D/R | 0.2072 | likely_benign | 0.2399 | benign | 0.6 | Stabilizing | 0.235 | N | 0.435 | neutral | None | None | None | None | N |
D/S | 0.0816 | likely_benign | 0.085 | benign | 0.124 | Stabilizing | 0.081 | N | 0.405 | neutral | None | None | None | None | N |
D/T | 0.1281 | likely_benign | 0.1399 | benign | 0.196 | Stabilizing | 0.149 | N | 0.415 | neutral | None | None | None | None | N |
D/V | 0.1237 | likely_benign | 0.141 | benign | 0.201 | Stabilizing | 0.317 | N | 0.456 | neutral | N | 0.502246652 | None | None | N |
D/W | 0.6915 | likely_pathogenic | 0.7418 | pathogenic | -0.073 | Destabilizing | 0.935 | D | 0.567 | neutral | None | None | None | None | N |
D/Y | 0.1433 | likely_benign | 0.1703 | benign | 0.14 | Stabilizing | 0.741 | D | 0.453 | neutral | N | 0.490472273 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.