Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25154 | 75685;75686;75687 | chr2:178570672;178570671;178570670 | chr2:179435399;179435398;179435397 |
N2AB | 23513 | 70762;70763;70764 | chr2:178570672;178570671;178570670 | chr2:179435399;179435398;179435397 |
N2A | 22586 | 67981;67982;67983 | chr2:178570672;178570671;178570670 | chr2:179435399;179435398;179435397 |
N2B | 16089 | 48490;48491;48492 | chr2:178570672;178570671;178570670 | chr2:179435399;179435398;179435397 |
Novex-1 | 16214 | 48865;48866;48867 | chr2:178570672;178570671;178570670 | chr2:179435399;179435398;179435397 |
Novex-2 | 16281 | 49066;49067;49068 | chr2:178570672;178570671;178570670 | chr2:179435399;179435398;179435397 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | None | N | 0.115 | 0.092 | 0.209622950755 | gnomAD-4.0.0 | 1.59197E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85959E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1289 | likely_benign | 0.1373 | benign | -0.355 | Destabilizing | 0.016 | N | 0.288 | neutral | None | None | None | None | N |
N/C | 0.1733 | likely_benign | 0.2064 | benign | 0.32 | Stabilizing | 0.676 | D | 0.322 | neutral | None | None | None | None | N |
N/D | 0.0946 | likely_benign | 0.0939 | benign | 0.251 | Stabilizing | None | N | 0.115 | neutral | N | 0.476011396 | None | None | N |
N/E | 0.2069 | likely_benign | 0.2196 | benign | 0.213 | Stabilizing | None | N | 0.116 | neutral | None | None | None | None | N |
N/F | 0.4079 | ambiguous | 0.4522 | ambiguous | -0.756 | Destabilizing | 0.356 | N | 0.341 | neutral | None | None | None | None | N |
N/G | 0.161 | likely_benign | 0.1654 | benign | -0.518 | Destabilizing | 0.016 | N | 0.207 | neutral | None | None | None | None | N |
N/H | 0.0963 | likely_benign | 0.1031 | benign | -0.556 | Destabilizing | 0.295 | N | 0.281 | neutral | D | 0.530749958 | None | None | N |
N/I | 0.1781 | likely_benign | 0.1942 | benign | -0.015 | Destabilizing | 0.171 | N | 0.373 | neutral | D | 0.530576599 | None | None | N |
N/K | 0.1848 | likely_benign | 0.2071 | benign | 0.168 | Stabilizing | None | N | 0.147 | neutral | N | 0.477472833 | None | None | N |
N/L | 0.1599 | likely_benign | 0.1749 | benign | -0.015 | Destabilizing | 0.072 | N | 0.357 | neutral | None | None | None | None | N |
N/M | 0.2559 | likely_benign | 0.2792 | benign | 0.311 | Stabilizing | 0.628 | D | 0.319 | neutral | None | None | None | None | N |
N/P | 0.2049 | likely_benign | 0.2163 | benign | -0.102 | Destabilizing | 0.072 | N | 0.357 | neutral | None | None | None | None | N |
N/Q | 0.217 | likely_benign | 0.2285 | benign | -0.306 | Destabilizing | 0.072 | N | 0.153 | neutral | None | None | None | None | N |
N/R | 0.2104 | likely_benign | 0.2464 | benign | 0.193 | Stabilizing | 0.038 | N | 0.154 | neutral | None | None | None | None | N |
N/S | 0.0681 | likely_benign | 0.0682 | benign | -0.099 | Destabilizing | None | N | 0.131 | neutral | N | 0.442184037 | None | None | N |
N/T | 0.0983 | likely_benign | 0.1049 | benign | 0.01 | Stabilizing | 0.012 | N | 0.166 | neutral | N | 0.497482746 | None | None | N |
N/V | 0.1574 | likely_benign | 0.173 | benign | -0.102 | Destabilizing | 0.072 | N | 0.393 | neutral | None | None | None | None | N |
N/W | 0.6449 | likely_pathogenic | 0.6972 | pathogenic | -0.738 | Destabilizing | 0.864 | D | 0.367 | neutral | None | None | None | None | N |
N/Y | 0.1387 | likely_benign | 0.1629 | benign | -0.465 | Destabilizing | 0.295 | N | 0.333 | neutral | N | 0.488859562 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.