Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25158 | 75697;75698;75699 | chr2:178570660;178570659;178570658 | chr2:179435387;179435386;179435385 |
N2AB | 23517 | 70774;70775;70776 | chr2:178570660;178570659;178570658 | chr2:179435387;179435386;179435385 |
N2A | 22590 | 67993;67994;67995 | chr2:178570660;178570659;178570658 | chr2:179435387;179435386;179435385 |
N2B | 16093 | 48502;48503;48504 | chr2:178570660;178570659;178570658 | chr2:179435387;179435386;179435385 |
Novex-1 | 16218 | 48877;48878;48879 | chr2:178570660;178570659;178570658 | chr2:179435387;179435386;179435385 |
Novex-2 | 16285 | 49078;49079;49080 | chr2:178570660;178570659;178570658 | chr2:179435387;179435386;179435385 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 0.967 | N | 0.679 | 0.525 | 0.783148497913 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 7.32654E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2688 | likely_benign | 0.2882 | benign | -2.299 | Highly Destabilizing | 0.845 | D | 0.512 | neutral | None | None | None | None | N |
L/C | 0.3642 | ambiguous | 0.3833 | ambiguous | -1.75 | Destabilizing | 0.999 | D | 0.67 | neutral | None | None | None | None | N |
L/D | 0.8468 | likely_pathogenic | 0.8712 | pathogenic | -1.885 | Destabilizing | 0.996 | D | 0.778 | deleterious | None | None | None | None | N |
L/E | 0.5007 | ambiguous | 0.524 | ambiguous | -1.785 | Destabilizing | 0.987 | D | 0.769 | deleterious | None | None | None | None | N |
L/F | 0.151 | likely_benign | 0.1548 | benign | -1.556 | Destabilizing | 0.967 | D | 0.602 | neutral | N | 0.465141041 | None | None | N |
L/G | 0.5812 | likely_pathogenic | 0.6237 | pathogenic | -2.74 | Highly Destabilizing | 0.987 | D | 0.757 | deleterious | None | None | None | None | N |
L/H | 0.2721 | likely_benign | 0.2917 | benign | -1.991 | Destabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | N |
L/I | 0.0936 | likely_benign | 0.0938 | benign | -1.093 | Destabilizing | 0.099 | N | 0.405 | neutral | N | 0.41648309 | None | None | N |
L/K | 0.3218 | likely_benign | 0.345 | ambiguous | -1.644 | Destabilizing | 0.975 | D | 0.707 | prob.neutral | None | None | None | None | N |
L/M | 0.087 | likely_benign | 0.087 | benign | -0.988 | Destabilizing | 0.693 | D | 0.47 | neutral | None | None | None | None | N |
L/N | 0.5085 | ambiguous | 0.5552 | ambiguous | -1.636 | Destabilizing | 0.996 | D | 0.777 | deleterious | None | None | None | None | N |
L/P | 0.9297 | likely_pathogenic | 0.9487 | pathogenic | -1.469 | Destabilizing | 0.996 | D | 0.778 | deleterious | None | None | None | None | N |
L/Q | 0.1957 | likely_benign | 0.2054 | benign | -1.701 | Destabilizing | 0.987 | D | 0.729 | prob.delet. | None | None | None | None | N |
L/R | 0.2421 | likely_benign | 0.2599 | benign | -1.156 | Destabilizing | 0.987 | D | 0.731 | prob.delet. | None | None | None | None | N |
L/S | 0.3568 | ambiguous | 0.388 | ambiguous | -2.399 | Highly Destabilizing | 0.967 | D | 0.679 | prob.neutral | N | 0.517418088 | None | None | N |
L/T | 0.1879 | likely_benign | 0.1957 | benign | -2.161 | Highly Destabilizing | 0.975 | D | 0.642 | neutral | None | None | None | None | N |
L/V | 0.0893 | likely_benign | 0.0888 | benign | -1.469 | Destabilizing | 0.025 | N | 0.387 | neutral | N | 0.413096068 | None | None | N |
L/W | 0.254 | likely_benign | 0.2578 | benign | -1.71 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
L/Y | 0.3444 | ambiguous | 0.3586 | ambiguous | -1.48 | Destabilizing | 0.987 | D | 0.712 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.