Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25159 | 75700;75701;75702 | chr2:178570657;178570656;178570655 | chr2:179435384;179435383;179435382 |
N2AB | 23518 | 70777;70778;70779 | chr2:178570657;178570656;178570655 | chr2:179435384;179435383;179435382 |
N2A | 22591 | 67996;67997;67998 | chr2:178570657;178570656;178570655 | chr2:179435384;179435383;179435382 |
N2B | 16094 | 48505;48506;48507 | chr2:178570657;178570656;178570655 | chr2:179435384;179435383;179435382 |
Novex-1 | 16219 | 48880;48881;48882 | chr2:178570657;178570656;178570655 | chr2:179435384;179435383;179435382 |
Novex-2 | 16286 | 49081;49082;49083 | chr2:178570657;178570656;178570655 | chr2:179435384;179435383;179435382 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.722 | N | 0.462 | 0.311 | 0.481246930725 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2337 | likely_benign | 0.264 | benign | -0.869 | Destabilizing | 0.565 | D | 0.433 | neutral | N | 0.492542865 | None | None | N |
E/C | 0.8384 | likely_pathogenic | 0.8734 | pathogenic | -0.259 | Destabilizing | 0.996 | D | 0.684 | prob.neutral | None | None | None | None | N |
E/D | 0.1643 | likely_benign | 0.1577 | benign | -0.94 | Destabilizing | 0.003 | N | 0.129 | neutral | D | 0.523477269 | None | None | N |
E/F | 0.7666 | likely_pathogenic | 0.8148 | pathogenic | -0.79 | Destabilizing | 0.987 | D | 0.66 | neutral | None | None | None | None | N |
E/G | 0.3195 | likely_benign | 0.3609 | ambiguous | -1.157 | Destabilizing | 0.722 | D | 0.462 | neutral | N | 0.494063802 | None | None | N |
E/H | 0.492 | ambiguous | 0.5483 | ambiguous | -1.069 | Destabilizing | 0.989 | D | 0.475 | neutral | None | None | None | None | N |
E/I | 0.3674 | ambiguous | 0.4287 | ambiguous | -0.106 | Destabilizing | 0.961 | D | 0.671 | neutral | None | None | None | None | N |
E/K | 0.3148 | likely_benign | 0.3801 | ambiguous | -0.247 | Destabilizing | 0.008 | N | 0.263 | neutral | N | 0.506947591 | None | None | N |
E/L | 0.4551 | ambiguous | 0.524 | ambiguous | -0.106 | Destabilizing | 0.923 | D | 0.599 | neutral | None | None | None | None | N |
E/M | 0.4763 | ambiguous | 0.5415 | ambiguous | 0.406 | Stabilizing | 0.996 | D | 0.635 | neutral | None | None | None | None | N |
E/N | 0.3255 | likely_benign | 0.3576 | ambiguous | -0.589 | Destabilizing | 0.633 | D | 0.416 | neutral | None | None | None | None | N |
E/P | 0.9775 | likely_pathogenic | 0.9851 | pathogenic | -0.34 | Destabilizing | 0.961 | D | 0.569 | neutral | None | None | None | None | N |
E/Q | 0.1675 | likely_benign | 0.1949 | benign | -0.541 | Destabilizing | 0.722 | D | 0.423 | neutral | N | 0.518396736 | None | None | N |
E/R | 0.4453 | ambiguous | 0.5186 | ambiguous | -0.191 | Destabilizing | 0.858 | D | 0.439 | neutral | None | None | None | None | N |
E/S | 0.2705 | likely_benign | 0.3019 | benign | -0.862 | Destabilizing | 0.633 | D | 0.391 | neutral | None | None | None | None | N |
E/T | 0.2701 | likely_benign | 0.2993 | benign | -0.617 | Destabilizing | 0.923 | D | 0.469 | neutral | None | None | None | None | N |
E/V | 0.227 | likely_benign | 0.2554 | benign | -0.34 | Destabilizing | 0.901 | D | 0.555 | neutral | N | 0.484326885 | None | None | N |
E/W | 0.9099 | likely_pathogenic | 0.9313 | pathogenic | -0.622 | Destabilizing | 0.996 | D | 0.682 | prob.neutral | None | None | None | None | N |
E/Y | 0.6724 | likely_pathogenic | 0.7309 | pathogenic | -0.535 | Destabilizing | 0.987 | D | 0.641 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.