Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25171 | 75736;75737;75738 | chr2:178570621;178570620;178570619 | chr2:179435348;179435347;179435346 |
N2AB | 23530 | 70813;70814;70815 | chr2:178570621;178570620;178570619 | chr2:179435348;179435347;179435346 |
N2A | 22603 | 68032;68033;68034 | chr2:178570621;178570620;178570619 | chr2:179435348;179435347;179435346 |
N2B | 16106 | 48541;48542;48543 | chr2:178570621;178570620;178570619 | chr2:179435348;179435347;179435346 |
Novex-1 | 16231 | 48916;48917;48918 | chr2:178570621;178570620;178570619 | chr2:179435348;179435347;179435346 |
Novex-2 | 16298 | 49117;49118;49119 | chr2:178570621;178570620;178570619 | chr2:179435348;179435347;179435346 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.025 | N | 0.332 | 0.061 | 0.162503812791 | gnomAD-4.0.0 | 1.59191E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85925E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5354 | ambiguous | 0.5508 | ambiguous | -1.857 | Destabilizing | 0.773 | D | 0.669 | neutral | D | 0.534755763 | None | None | N |
V/C | 0.7648 | likely_pathogenic | 0.7829 | pathogenic | -1.63 | Destabilizing | 0.154 | N | 0.585 | neutral | None | None | None | None | N |
V/D | 0.9295 | likely_pathogenic | 0.9439 | pathogenic | -2.125 | Highly Destabilizing | 0.996 | D | 0.873 | deleterious | None | None | None | None | N |
V/E | 0.8622 | likely_pathogenic | 0.8944 | pathogenic | -1.976 | Destabilizing | 0.994 | D | 0.853 | deleterious | D | 0.535516232 | None | None | N |
V/F | 0.3503 | ambiguous | 0.3981 | ambiguous | -1.209 | Destabilizing | 0.975 | D | 0.767 | deleterious | None | None | None | None | N |
V/G | 0.6482 | likely_pathogenic | 0.6835 | pathogenic | -2.338 | Highly Destabilizing | 0.983 | D | 0.871 | deleterious | N | 0.512803621 | None | None | N |
V/H | 0.896 | likely_pathogenic | 0.9182 | pathogenic | -2.047 | Highly Destabilizing | 0.999 | D | 0.856 | deleterious | None | None | None | None | N |
V/I | 0.0788 | likely_benign | 0.0787 | benign | -0.556 | Destabilizing | 0.025 | N | 0.332 | neutral | N | 0.403035711 | None | None | N |
V/K | 0.8511 | likely_pathogenic | 0.8956 | pathogenic | -1.46 | Destabilizing | 0.987 | D | 0.857 | deleterious | None | None | None | None | N |
V/L | 0.2849 | likely_benign | 0.3168 | benign | -0.556 | Destabilizing | 0.369 | N | 0.6 | neutral | N | 0.51778066 | None | None | N |
V/M | 0.25 | likely_benign | 0.2785 | benign | -0.656 | Destabilizing | 0.975 | D | 0.694 | prob.neutral | None | None | None | None | N |
V/N | 0.7589 | likely_pathogenic | 0.7641 | pathogenic | -1.601 | Destabilizing | 0.996 | D | 0.88 | deleterious | None | None | None | None | N |
V/P | 0.9732 | likely_pathogenic | 0.9809 | pathogenic | -0.959 | Destabilizing | 0.996 | D | 0.851 | deleterious | None | None | None | None | N |
V/Q | 0.8029 | likely_pathogenic | 0.8437 | pathogenic | -1.553 | Destabilizing | 0.996 | D | 0.867 | deleterious | None | None | None | None | N |
V/R | 0.8043 | likely_pathogenic | 0.8583 | pathogenic | -1.231 | Destabilizing | 0.996 | D | 0.882 | deleterious | None | None | None | None | N |
V/S | 0.6444 | likely_pathogenic | 0.6692 | pathogenic | -2.26 | Highly Destabilizing | 0.987 | D | 0.839 | deleterious | None | None | None | None | N |
V/T | 0.612 | likely_pathogenic | 0.6365 | pathogenic | -1.971 | Destabilizing | 0.916 | D | 0.703 | prob.neutral | None | None | None | None | N |
V/W | 0.9413 | likely_pathogenic | 0.9585 | pathogenic | -1.616 | Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
V/Y | 0.8038 | likely_pathogenic | 0.8489 | pathogenic | -1.246 | Destabilizing | 0.987 | D | 0.753 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.