Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25174 | 75745;75746;75747 | chr2:178570612;178570611;178570610 | chr2:179435339;179435338;179435337 |
N2AB | 23533 | 70822;70823;70824 | chr2:178570612;178570611;178570610 | chr2:179435339;179435338;179435337 |
N2A | 22606 | 68041;68042;68043 | chr2:178570612;178570611;178570610 | chr2:179435339;179435338;179435337 |
N2B | 16109 | 48550;48551;48552 | chr2:178570612;178570611;178570610 | chr2:179435339;179435338;179435337 |
Novex-1 | 16234 | 48925;48926;48927 | chr2:178570612;178570611;178570610 | chr2:179435339;179435338;179435337 |
Novex-2 | 16301 | 49126;49127;49128 | chr2:178570612;178570611;178570610 | chr2:179435339;179435338;179435337 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs772038176 | -0.505 | 0.955 | N | 0.659 | 0.289 | 0.637886457206 | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.35E-05 | 0 |
A/V | rs772038176 | -0.505 | 0.955 | N | 0.659 | 0.289 | 0.637886457206 | gnomAD-4.0.0 | 4.77585E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57775E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4432 | ambiguous | 0.4468 | ambiguous | -1.842 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
A/D | 0.9664 | likely_pathogenic | 0.9726 | pathogenic | -2.579 | Highly Destabilizing | 0.995 | D | 0.775 | deleterious | None | None | None | None | N |
A/E | 0.9616 | likely_pathogenic | 0.9732 | pathogenic | -2.524 | Highly Destabilizing | 0.993 | D | 0.767 | deleterious | D | 0.544572041 | None | None | N |
A/F | 0.9032 | likely_pathogenic | 0.9229 | pathogenic | -1.194 | Destabilizing | 0.998 | D | 0.795 | deleterious | None | None | None | None | N |
A/G | 0.3176 | likely_benign | 0.3213 | benign | -1.526 | Destabilizing | 0.977 | D | 0.64 | neutral | D | 0.526214296 | None | None | N |
A/H | 0.9725 | likely_pathogenic | 0.9791 | pathogenic | -1.514 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
A/I | 0.4783 | ambiguous | 0.5167 | ambiguous | -0.486 | Destabilizing | 0.995 | D | 0.784 | deleterious | None | None | None | None | N |
A/K | 0.9859 | likely_pathogenic | 0.9909 | pathogenic | -1.446 | Destabilizing | 0.995 | D | 0.769 | deleterious | None | None | None | None | N |
A/L | 0.502 | ambiguous | 0.5564 | ambiguous | -0.486 | Destabilizing | 0.966 | D | 0.675 | neutral | None | None | None | None | N |
A/M | 0.5615 | ambiguous | 0.6087 | pathogenic | -0.747 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
A/N | 0.8846 | likely_pathogenic | 0.9048 | pathogenic | -1.588 | Destabilizing | 0.995 | D | 0.772 | deleterious | None | None | None | None | N |
A/P | 0.8084 | likely_pathogenic | 0.8481 | pathogenic | -0.693 | Destabilizing | 0.997 | D | 0.791 | deleterious | N | 0.502273918 | None | None | N |
A/Q | 0.9505 | likely_pathogenic | 0.9636 | pathogenic | -1.707 | Destabilizing | 0.998 | D | 0.794 | deleterious | None | None | None | None | N |
A/R | 0.9672 | likely_pathogenic | 0.9777 | pathogenic | -1.158 | Destabilizing | 0.998 | D | 0.784 | deleterious | None | None | None | None | N |
A/S | 0.1653 | likely_benign | 0.1606 | benign | -1.928 | Destabilizing | 0.955 | D | 0.589 | neutral | N | 0.519210386 | None | None | N |
A/T | 0.1427 | likely_benign | 0.1473 | benign | -1.778 | Destabilizing | 0.568 | D | 0.415 | neutral | D | 0.53240897 | None | None | N |
A/V | 0.1927 | likely_benign | 0.2073 | benign | -0.693 | Destabilizing | 0.955 | D | 0.659 | neutral | N | 0.500058904 | None | None | N |
A/W | 0.9894 | likely_pathogenic | 0.992 | pathogenic | -1.608 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
A/Y | 0.9655 | likely_pathogenic | 0.975 | pathogenic | -1.179 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.