Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25183 | 75772;75773;75774 | chr2:178570585;178570584;178570583 | chr2:179435312;179435311;179435310 |
N2AB | 23542 | 70849;70850;70851 | chr2:178570585;178570584;178570583 | chr2:179435312;179435311;179435310 |
N2A | 22615 | 68068;68069;68070 | chr2:178570585;178570584;178570583 | chr2:179435312;179435311;179435310 |
N2B | 16118 | 48577;48578;48579 | chr2:178570585;178570584;178570583 | chr2:179435312;179435311;179435310 |
Novex-1 | 16243 | 48952;48953;48954 | chr2:178570585;178570584;178570583 | chr2:179435312;179435311;179435310 |
Novex-2 | 16310 | 49153;49154;49155 | chr2:178570585;178570584;178570583 | chr2:179435312;179435311;179435310 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/K | None | None | 0.175 | N | 0.577 | 0.176 | 0.449764926163 | gnomAD-4.0.0 | 1.02655E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.8735E-05 | 0 | 1.16945E-05 | 0 | 1.65728E-05 |
I/V | rs1180372550 | None | None | N | 0.17 | 0.053 | 0.180583059064 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 3.16456E-03 | 0 | 0 | 0 |
I/V | rs1180372550 | None | None | N | 0.17 | 0.053 | 0.180583059064 | gnomAD-4.0.0 | 2.56343E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 4.48833E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1917 | likely_benign | 0.247 | benign | -2.131 | Highly Destabilizing | 0.055 | N | 0.499 | neutral | None | None | None | None | N |
I/C | 0.3874 | ambiguous | 0.4778 | ambiguous | -1.452 | Destabilizing | 0.883 | D | 0.549 | neutral | None | None | None | None | N |
I/D | 0.4472 | ambiguous | 0.5399 | ambiguous | -1.785 | Destabilizing | 0.124 | N | 0.577 | neutral | None | None | None | None | N |
I/E | 0.3227 | likely_benign | 0.3906 | ambiguous | -1.606 | Destabilizing | 0.22 | N | 0.582 | neutral | None | None | None | None | N |
I/F | 0.1217 | likely_benign | 0.1466 | benign | -1.198 | Destabilizing | 0.497 | N | 0.539 | neutral | None | None | None | None | N |
I/G | 0.4475 | ambiguous | 0.5498 | ambiguous | -2.635 | Highly Destabilizing | 0.124 | N | 0.542 | neutral | None | None | None | None | N |
I/H | 0.2295 | likely_benign | 0.2699 | benign | -1.966 | Destabilizing | 0.667 | D | 0.617 | neutral | None | None | None | None | N |
I/K | 0.1934 | likely_benign | 0.2355 | benign | -1.474 | Destabilizing | 0.175 | N | 0.577 | neutral | N | 0.450493223 | None | None | N |
I/L | 0.094 | likely_benign | 0.109 | benign | -0.716 | Destabilizing | 0.019 | N | 0.355 | neutral | N | 0.486491308 | None | None | N |
I/M | 0.0846 | likely_benign | 0.0986 | benign | -0.701 | Destabilizing | 0.427 | N | 0.524 | neutral | N | 0.476410388 | None | None | N |
I/N | 0.1363 | likely_benign | 0.1645 | benign | -1.647 | Destabilizing | 0.001 | N | 0.551 | neutral | None | None | None | None | N |
I/P | 0.9157 | likely_pathogenic | 0.9424 | pathogenic | -1.163 | Destabilizing | 0.859 | D | 0.625 | neutral | None | None | None | None | N |
I/Q | 0.2134 | likely_benign | 0.2603 | benign | -1.563 | Destabilizing | 0.667 | D | 0.617 | neutral | None | None | None | None | N |
I/R | 0.1469 | likely_benign | 0.1842 | benign | -1.185 | Destabilizing | 0.427 | N | 0.627 | neutral | N | 0.457245837 | None | None | N |
I/S | 0.1297 | likely_benign | 0.1635 | benign | -2.421 | Highly Destabilizing | 0.055 | N | 0.497 | neutral | None | None | None | None | N |
I/T | 0.0848 | likely_benign | 0.1008 | benign | -2.098 | Highly Destabilizing | 0.001 | N | 0.323 | neutral | N | 0.349075435 | None | None | N |
I/V | 0.0604 | likely_benign | 0.0679 | benign | -1.163 | Destabilizing | None | N | 0.17 | neutral | N | 0.43002195 | None | None | N |
I/W | 0.6551 | likely_pathogenic | 0.7097 | pathogenic | -1.475 | Destabilizing | 0.958 | D | 0.664 | neutral | None | None | None | None | N |
I/Y | 0.3047 | likely_benign | 0.3641 | ambiguous | -1.178 | Destabilizing | 0.667 | D | 0.565 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.