Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25231 | 75916;75917;75918 | chr2:178570441;178570440;178570439 | chr2:179435168;179435167;179435166 |
N2AB | 23590 | 70993;70994;70995 | chr2:178570441;178570440;178570439 | chr2:179435168;179435167;179435166 |
N2A | 22663 | 68212;68213;68214 | chr2:178570441;178570440;178570439 | chr2:179435168;179435167;179435166 |
N2B | 16166 | 48721;48722;48723 | chr2:178570441;178570440;178570439 | chr2:179435168;179435167;179435166 |
Novex-1 | 16291 | 49096;49097;49098 | chr2:178570441;178570440;178570439 | chr2:179435168;179435167;179435166 |
Novex-2 | 16358 | 49297;49298;49299 | chr2:178570441;178570440;178570439 | chr2:179435168;179435167;179435166 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | 0.151 | N | 0.227 | 0.081 | 0.163833314356 | gnomAD-4.0.0 | 1.59256E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85963E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3105 | likely_benign | 0.3049 | benign | -0.19 | Destabilizing | 0.985 | D | 0.546 | neutral | None | None | None | None | I |
Q/C | 0.6601 | likely_pathogenic | 0.6747 | pathogenic | 0.195 | Stabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | I |
Q/D | 0.3968 | ambiguous | 0.3742 | ambiguous | 0.033 | Stabilizing | 0.985 | D | 0.477 | neutral | None | None | None | None | I |
Q/E | 0.0869 | likely_benign | 0.0865 | benign | -0.001 | Destabilizing | 0.91 | D | 0.422 | neutral | N | 0.392069356 | None | None | I |
Q/F | 0.7158 | likely_pathogenic | 0.7205 | pathogenic | -0.422 | Destabilizing | 0.996 | D | 0.646 | neutral | None | None | None | None | I |
Q/G | 0.3889 | ambiguous | 0.3885 | ambiguous | -0.368 | Destabilizing | 0.985 | D | 0.547 | neutral | None | None | None | None | I |
Q/H | 0.2338 | likely_benign | 0.2285 | benign | -0.314 | Destabilizing | 0.151 | N | 0.227 | neutral | N | 0.400304837 | None | None | I |
Q/I | 0.5638 | ambiguous | 0.5403 | ambiguous | 0.188 | Stabilizing | 0.999 | D | 0.642 | neutral | None | None | None | None | I |
Q/K | 0.1898 | likely_benign | 0.1938 | benign | 0.068 | Stabilizing | 0.961 | D | 0.494 | neutral | N | 0.458504991 | None | None | I |
Q/L | 0.1751 | likely_benign | 0.1708 | benign | 0.188 | Stabilizing | 0.98 | D | 0.521 | neutral | N | 0.470183423 | None | None | I |
Q/M | 0.4174 | ambiguous | 0.4157 | ambiguous | 0.421 | Stabilizing | 0.999 | D | 0.428 | neutral | None | None | None | None | I |
Q/N | 0.3318 | likely_benign | 0.3175 | benign | -0.208 | Destabilizing | 0.97 | D | 0.479 | neutral | None | None | None | None | I |
Q/P | 0.6612 | likely_pathogenic | 0.6632 | pathogenic | 0.09 | Stabilizing | 0.998 | D | 0.508 | neutral | N | 0.46064122 | None | None | I |
Q/R | 0.1831 | likely_benign | 0.1898 | benign | 0.192 | Stabilizing | 0.961 | D | 0.508 | neutral | N | 0.434340053 | None | None | I |
Q/S | 0.3303 | likely_benign | 0.3236 | benign | -0.2 | Destabilizing | 0.985 | D | 0.468 | neutral | None | None | None | None | I |
Q/T | 0.3584 | ambiguous | 0.3293 | benign | -0.082 | Destabilizing | 0.985 | D | 0.494 | neutral | None | None | None | None | I |
Q/V | 0.377 | ambiguous | 0.3642 | ambiguous | 0.09 | Stabilizing | 0.999 | D | 0.492 | neutral | None | None | None | None | I |
Q/W | 0.6145 | likely_pathogenic | 0.6204 | pathogenic | -0.415 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
Q/Y | 0.4838 | ambiguous | 0.492 | ambiguous | -0.155 | Destabilizing | 0.991 | D | 0.495 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.