Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25265 | 76018;76019;76020 | chr2:178570339;178570338;178570337 | chr2:179435066;179435065;179435064 |
N2AB | 23624 | 71095;71096;71097 | chr2:178570339;178570338;178570337 | chr2:179435066;179435065;179435064 |
N2A | 22697 | 68314;68315;68316 | chr2:178570339;178570338;178570337 | chr2:179435066;179435065;179435064 |
N2B | 16200 | 48823;48824;48825 | chr2:178570339;178570338;178570337 | chr2:179435066;179435065;179435064 |
Novex-1 | 16325 | 49198;49199;49200 | chr2:178570339;178570338;178570337 | chr2:179435066;179435065;179435064 |
Novex-2 | 16392 | 49399;49400;49401 | chr2:178570339;178570338;178570337 | chr2:179435066;179435065;179435064 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.967 | N | 0.615 | 0.273 | 0.184867976434 | gnomAD-4.0.0 | 6.84426E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99596E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7271 | likely_pathogenic | 0.8158 | pathogenic | None | Stabilizing | 0.845 | D | 0.57 | neutral | None | None | None | None | N |
K/C | 0.8393 | likely_pathogenic | 0.8991 | pathogenic | -0.073 | Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
K/D | 0.9052 | likely_pathogenic | 0.936 | pathogenic | 0.045 | Stabilizing | 0.975 | D | 0.733 | prob.delet. | None | None | None | None | N |
K/E | 0.6356 | likely_pathogenic | 0.7422 | pathogenic | 0.063 | Stabilizing | 0.892 | D | 0.464 | neutral | N | 0.515131852 | None | None | N |
K/F | 0.9448 | likely_pathogenic | 0.9645 | pathogenic | -0.1 | Destabilizing | 0.987 | D | 0.777 | deleterious | None | None | None | None | N |
K/G | 0.8306 | likely_pathogenic | 0.8835 | pathogenic | -0.235 | Destabilizing | 0.975 | D | 0.722 | prob.delet. | None | None | None | None | N |
K/H | 0.4844 | ambiguous | 0.5838 | pathogenic | -0.545 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
K/I | 0.6145 | likely_pathogenic | 0.7096 | pathogenic | 0.549 | Stabilizing | 0.975 | D | 0.776 | deleterious | None | None | None | None | N |
K/L | 0.6886 | likely_pathogenic | 0.7798 | pathogenic | 0.549 | Stabilizing | 0.845 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/M | 0.5167 | ambiguous | 0.6331 | pathogenic | 0.356 | Stabilizing | 0.999 | D | 0.733 | prob.delet. | N | 0.483472332 | None | None | N |
K/N | 0.8073 | likely_pathogenic | 0.8687 | pathogenic | 0.273 | Stabilizing | 0.967 | D | 0.615 | neutral | N | 0.500567832 | None | None | N |
K/P | 0.8959 | likely_pathogenic | 0.9321 | pathogenic | 0.395 | Stabilizing | 0.987 | D | 0.759 | deleterious | None | None | None | None | N |
K/Q | 0.3188 | likely_benign | 0.4171 | ambiguous | 0.098 | Stabilizing | 0.983 | D | 0.599 | neutral | N | 0.469545132 | None | None | N |
K/R | 0.0913 | likely_benign | 0.0954 | benign | -0.065 | Destabilizing | 0.892 | D | 0.503 | neutral | N | 0.512496979 | None | None | N |
K/S | 0.763 | likely_pathogenic | 0.8424 | pathogenic | -0.219 | Destabilizing | 0.845 | D | 0.481 | neutral | None | None | None | None | N |
K/T | 0.3673 | ambiguous | 0.4873 | ambiguous | -0.045 | Destabilizing | 0.025 | N | 0.388 | neutral | N | 0.444900976 | None | None | N |
K/V | 0.5422 | ambiguous | 0.6388 | pathogenic | 0.395 | Stabilizing | 0.95 | D | 0.719 | prob.delet. | None | None | None | None | N |
K/W | 0.8945 | likely_pathogenic | 0.9356 | pathogenic | -0.094 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
K/Y | 0.8618 | likely_pathogenic | 0.903 | pathogenic | 0.243 | Stabilizing | 0.996 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.