Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25267 | 76024;76025;76026 | chr2:178570333;178570332;178570331 | chr2:179435060;179435059;179435058 |
N2AB | 23626 | 71101;71102;71103 | chr2:178570333;178570332;178570331 | chr2:179435060;179435059;179435058 |
N2A | 22699 | 68320;68321;68322 | chr2:178570333;178570332;178570331 | chr2:179435060;179435059;179435058 |
N2B | 16202 | 48829;48830;48831 | chr2:178570333;178570332;178570331 | chr2:179435060;179435059;179435058 |
Novex-1 | 16327 | 49204;49205;49206 | chr2:178570333;178570332;178570331 | chr2:179435060;179435059;179435058 |
Novex-2 | 16394 | 49405;49406;49407 | chr2:178570333;178570332;178570331 | chr2:179435060;179435059;179435058 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1707717762 | None | 0.581 | N | 0.417 | 0.195 | 0.27132560031 | gnomAD-4.0.0 | 1.5924E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85946E-06 | 0 | 0 |
T/S | None | None | 0.738 | N | 0.415 | 0.233 | 0.262175524916 | gnomAD-4.0.0 | 1.5924E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85946E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1434 | likely_benign | 0.146 | benign | -0.57 | Destabilizing | 0.581 | D | 0.417 | neutral | N | 0.470384961 | None | None | N |
T/C | 0.4876 | ambiguous | 0.5351 | ambiguous | -0.417 | Destabilizing | 0.993 | D | 0.734 | prob.delet. | None | None | None | None | N |
T/D | 0.6838 | likely_pathogenic | 0.7418 | pathogenic | 0.127 | Stabilizing | 0.976 | D | 0.765 | deleterious | None | None | None | None | N |
T/E | 0.6114 | likely_pathogenic | 0.6658 | pathogenic | 0.126 | Stabilizing | 0.929 | D | 0.758 | deleterious | None | None | None | None | N |
T/F | 0.4149 | ambiguous | 0.4057 | ambiguous | -0.607 | Destabilizing | 0.764 | D | 0.778 | deleterious | None | None | None | None | N |
T/G | 0.2435 | likely_benign | 0.2589 | benign | -0.82 | Destabilizing | 0.929 | D | 0.692 | prob.neutral | None | None | None | None | N |
T/H | 0.4276 | ambiguous | 0.459 | ambiguous | -1.006 | Destabilizing | 0.993 | D | 0.755 | deleterious | None | None | None | None | N |
T/I | 0.3208 | likely_benign | 0.3467 | ambiguous | -0.002 | Destabilizing | 0.709 | D | 0.684 | prob.neutral | N | 0.48086912 | None | None | N |
T/K | 0.4275 | ambiguous | 0.4582 | ambiguous | -0.625 | Destabilizing | 0.929 | D | 0.747 | deleterious | None | None | None | None | N |
T/L | 0.1426 | likely_benign | 0.1178 | benign | -0.002 | Destabilizing | 0.006 | N | 0.329 | neutral | None | None | None | None | N |
T/M | 0.1242 | likely_benign | 0.1047 | benign | 0.039 | Stabilizing | 0.924 | D | 0.767 | deleterious | None | None | None | None | N |
T/N | 0.1828 | likely_benign | 0.1896 | benign | -0.523 | Destabilizing | 0.968 | D | 0.638 | neutral | N | 0.471016844 | None | None | N |
T/P | 0.1402 | likely_benign | 0.1621 | benign | -0.159 | Destabilizing | 0.968 | D | 0.783 | deleterious | N | 0.482057208 | None | None | N |
T/Q | 0.3447 | ambiguous | 0.352 | ambiguous | -0.627 | Destabilizing | 0.976 | D | 0.781 | deleterious | None | None | None | None | N |
T/R | 0.3923 | ambiguous | 0.4262 | ambiguous | -0.414 | Destabilizing | 0.929 | D | 0.783 | deleterious | None | None | None | None | N |
T/S | 0.1424 | likely_benign | 0.1487 | benign | -0.805 | Destabilizing | 0.738 | D | 0.415 | neutral | N | 0.491294987 | None | None | N |
T/V | 0.2144 | likely_benign | 0.2213 | benign | -0.159 | Destabilizing | 0.48 | N | 0.419 | neutral | None | None | None | None | N |
T/W | 0.71 | likely_pathogenic | 0.7201 | pathogenic | -0.588 | Destabilizing | 0.993 | D | 0.755 | deleterious | None | None | None | None | N |
T/Y | 0.4744 | ambiguous | 0.49 | ambiguous | -0.345 | Destabilizing | 0.929 | D | 0.782 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.