Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2527 | 7804;7805;7806 | chr2:178773477;178773476;178773475 | chr2:179638204;179638203;179638202 |
N2AB | 2527 | 7804;7805;7806 | chr2:178773477;178773476;178773475 | chr2:179638204;179638203;179638202 |
N2A | 2527 | 7804;7805;7806 | chr2:178773477;178773476;178773475 | chr2:179638204;179638203;179638202 |
N2B | 2481 | 7666;7667;7668 | chr2:178773477;178773476;178773475 | chr2:179638204;179638203;179638202 |
Novex-1 | 2481 | 7666;7667;7668 | chr2:178773477;178773476;178773475 | chr2:179638204;179638203;179638202 |
Novex-2 | 2481 | 7666;7667;7668 | chr2:178773477;178773476;178773475 | chr2:179638204;179638203;179638202 |
Novex-3 | 2527 | 7804;7805;7806 | chr2:178773477;178773476;178773475 | chr2:179638204;179638203;179638202 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs773079394 | -0.801 | None | N | 0.193 | 0.107 | 0.104622674875 | gnomAD-2.1.1 | 7.09E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 7.77E-06 | 0 |
N/D | rs773079394 | -0.801 | None | N | 0.193 | 0.107 | 0.104622674875 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/D | rs773079394 | -0.801 | None | N | 0.193 | 0.107 | 0.104622674875 | gnomAD-4.0.0 | 2.56138E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.39191E-06 | 1.34002E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.183 | likely_benign | 0.1781 | benign | -0.662 | Destabilizing | 0.035 | N | 0.439 | neutral | None | None | None | None | N |
N/C | 0.1886 | likely_benign | 0.1901 | benign | 0.204 | Stabilizing | 0.935 | D | 0.574 | neutral | None | None | None | None | N |
N/D | 0.1227 | likely_benign | 0.1157 | benign | -0.476 | Destabilizing | None | N | 0.193 | neutral | N | 0.443471533 | None | None | N |
N/E | 0.2611 | likely_benign | 0.2439 | benign | -0.46 | Destabilizing | 0.035 | N | 0.541 | neutral | None | None | None | None | N |
N/F | 0.2987 | likely_benign | 0.2934 | benign | -0.774 | Destabilizing | 0.791 | D | 0.597 | neutral | None | None | None | None | N |
N/G | 0.2731 | likely_benign | 0.2612 | benign | -0.917 | Destabilizing | 0.067 | N | 0.516 | neutral | None | None | None | None | N |
N/H | 0.0651 | likely_benign | 0.0663 | benign | -0.895 | Destabilizing | 0.484 | N | 0.589 | neutral | N | 0.45258781 | None | None | N |
N/I | 0.1233 | likely_benign | 0.1226 | benign | -0.054 | Destabilizing | 0.317 | N | 0.601 | neutral | N | 0.49395313 | None | None | N |
N/K | 0.1511 | likely_benign | 0.1428 | benign | -0.139 | Destabilizing | 0.027 | N | 0.529 | neutral | N | 0.437056892 | None | None | N |
N/L | 0.1458 | likely_benign | 0.1475 | benign | -0.054 | Destabilizing | 0.149 | N | 0.539 | neutral | None | None | None | None | N |
N/M | 0.237 | likely_benign | 0.2315 | benign | 0.544 | Stabilizing | 0.935 | D | 0.575 | neutral | None | None | None | None | N |
N/P | 0.65 | likely_pathogenic | 0.6231 | pathogenic | -0.228 | Destabilizing | 0.555 | D | 0.607 | neutral | None | None | None | None | N |
N/Q | 0.1963 | likely_benign | 0.1909 | benign | -0.783 | Destabilizing | 0.149 | N | 0.586 | neutral | None | None | None | None | N |
N/R | 0.1569 | likely_benign | 0.1483 | benign | -0.056 | Destabilizing | 0.001 | N | 0.269 | neutral | None | None | None | None | N |
N/S | 0.0784 | likely_benign | 0.0795 | benign | -0.548 | Destabilizing | 0.005 | N | 0.19 | neutral | N | 0.447742343 | None | None | N |
N/T | 0.1033 | likely_benign | 0.0983 | benign | -0.368 | Destabilizing | 0.002 | N | 0.185 | neutral | N | 0.434599291 | None | None | N |
N/V | 0.1477 | likely_benign | 0.1458 | benign | -0.228 | Destabilizing | 0.149 | N | 0.577 | neutral | None | None | None | None | N |
N/W | 0.5964 | likely_pathogenic | 0.585 | pathogenic | -0.609 | Destabilizing | 0.935 | D | 0.606 | neutral | None | None | None | None | N |
N/Y | 0.1011 | likely_benign | 0.1016 | benign | -0.388 | Destabilizing | 0.741 | D | 0.599 | neutral | N | 0.452405878 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.