Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25329 | 76210;76211;76212 | chr2:178570147;178570146;178570145 | chr2:179434874;179434873;179434872 |
N2AB | 23688 | 71287;71288;71289 | chr2:178570147;178570146;178570145 | chr2:179434874;179434873;179434872 |
N2A | 22761 | 68506;68507;68508 | chr2:178570147;178570146;178570145 | chr2:179434874;179434873;179434872 |
N2B | 16264 | 49015;49016;49017 | chr2:178570147;178570146;178570145 | chr2:179434874;179434873;179434872 |
Novex-1 | 16389 | 49390;49391;49392 | chr2:178570147;178570146;178570145 | chr2:179434874;179434873;179434872 |
Novex-2 | 16456 | 49591;49592;49593 | chr2:178570147;178570146;178570145 | chr2:179434874;179434873;179434872 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.007 | N | 0.071 | 0.086 | 0.152612264143 | gnomAD-4.0.0 | 1.59182E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43299E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3095 | likely_benign | 0.4055 | ambiguous | -0.821 | Destabilizing | 0.992 | D | 0.318 | neutral | None | None | None | None | I |
A/D | 0.1366 | likely_benign | 0.1458 | benign | -0.524 | Destabilizing | 0.447 | N | 0.381 | neutral | None | None | None | None | I |
A/E | 0.1244 | likely_benign | 0.1254 | benign | -0.679 | Destabilizing | 0.004 | N | 0.17 | neutral | N | 0.402193136 | None | None | I |
A/F | 0.2033 | likely_benign | 0.25 | benign | -0.914 | Destabilizing | 0.92 | D | 0.405 | neutral | None | None | None | None | I |
A/G | 0.1054 | likely_benign | 0.1183 | benign | -0.221 | Destabilizing | 0.201 | N | 0.241 | neutral | N | 0.495220727 | None | None | I |
A/H | 0.2724 | likely_benign | 0.3318 | benign | -0.213 | Destabilizing | 0.977 | D | 0.367 | neutral | None | None | None | None | I |
A/I | 0.1059 | likely_benign | 0.131 | benign | -0.395 | Destabilizing | 0.447 | N | 0.303 | neutral | None | None | None | None | I |
A/K | 0.2045 | likely_benign | 0.2227 | benign | -0.518 | Destabilizing | 0.447 | N | 0.304 | neutral | None | None | None | None | I |
A/L | 0.0896 | likely_benign | 0.1065 | benign | -0.395 | Destabilizing | 0.25 | N | 0.3 | neutral | None | None | None | None | I |
A/M | 0.1342 | likely_benign | 0.159 | benign | -0.517 | Destabilizing | 0.92 | D | 0.314 | neutral | None | None | None | None | I |
A/N | 0.1268 | likely_benign | 0.1502 | benign | -0.232 | Destabilizing | 0.447 | N | 0.414 | neutral | None | None | None | None | I |
A/P | 0.124 | likely_benign | 0.1443 | benign | -0.309 | Destabilizing | 0.896 | D | 0.343 | neutral | N | 0.481712712 | None | None | I |
A/Q | 0.1759 | likely_benign | 0.1972 | benign | -0.509 | Destabilizing | 0.739 | D | 0.335 | neutral | None | None | None | None | I |
A/R | 0.2222 | likely_benign | 0.2406 | benign | -0.074 | Destabilizing | 0.85 | D | 0.337 | neutral | None | None | None | None | I |
A/S | 0.0796 | likely_benign | 0.0827 | benign | -0.409 | Destabilizing | 0.007 | N | 0.069 | neutral | N | 0.465281822 | None | None | I |
A/T | 0.0696 | likely_benign | 0.0731 | benign | -0.491 | Destabilizing | 0.007 | N | 0.071 | neutral | N | 0.418778741 | None | None | I |
A/V | 0.0724 | likely_benign | 0.0807 | benign | -0.309 | Destabilizing | 0.007 | N | 0.076 | neutral | N | 0.452219311 | None | None | I |
A/W | 0.5299 | ambiguous | 0.6075 | pathogenic | -1.014 | Destabilizing | 0.992 | D | 0.445 | neutral | None | None | None | None | I |
A/Y | 0.2904 | likely_benign | 0.3678 | ambiguous | -0.688 | Destabilizing | 0.972 | D | 0.398 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.