Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25330 | 76213;76214;76215 | chr2:178570144;178570143;178570142 | chr2:179434871;179434870;179434869 |
N2AB | 23689 | 71290;71291;71292 | chr2:178570144;178570143;178570142 | chr2:179434871;179434870;179434869 |
N2A | 22762 | 68509;68510;68511 | chr2:178570144;178570143;178570142 | chr2:179434871;179434870;179434869 |
N2B | 16265 | 49018;49019;49020 | chr2:178570144;178570143;178570142 | chr2:179434871;179434870;179434869 |
Novex-1 | 16390 | 49393;49394;49395 | chr2:178570144;178570143;178570142 | chr2:179434871;179434870;179434869 |
Novex-2 | 16457 | 49594;49595;49596 | chr2:178570144;178570143;178570142 | chr2:179434871;179434870;179434869 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | 0.052 | N | 0.422 | 0.101 | 0.152612264143 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0797 | likely_benign | 0.0983 | benign | -0.395 | Destabilizing | 0.052 | N | 0.422 | neutral | N | 0.511878116 | None | None | I |
S/C | 0.0966 | likely_benign | 0.1283 | benign | -0.24 | Destabilizing | 0.915 | D | 0.387 | neutral | N | 0.481088794 | None | None | I |
S/D | 0.3237 | likely_benign | 0.3754 | ambiguous | -0.076 | Destabilizing | 0.081 | N | 0.369 | neutral | None | None | None | None | I |
S/E | 0.4478 | ambiguous | 0.5281 | ambiguous | -0.178 | Destabilizing | 0.149 | N | 0.372 | neutral | None | None | None | None | I |
S/F | 0.1044 | likely_benign | 0.1928 | benign | -1.044 | Destabilizing | None | N | 0.16 | neutral | N | 0.50370135 | None | None | I |
S/G | 0.1037 | likely_benign | 0.1151 | benign | -0.49 | Destabilizing | 0.067 | N | 0.359 | neutral | None | None | None | None | I |
S/H | 0.2415 | likely_benign | 0.3382 | benign | -1.01 | Destabilizing | 0.38 | N | 0.422 | neutral | None | None | None | None | I |
S/I | 0.1801 | likely_benign | 0.2611 | benign | -0.274 | Destabilizing | 0.081 | N | 0.541 | neutral | None | None | None | None | I |
S/K | 0.5095 | ambiguous | 0.6088 | pathogenic | -0.491 | Destabilizing | 0.149 | N | 0.373 | neutral | None | None | None | None | I |
S/L | 0.1056 | likely_benign | 0.1251 | benign | -0.274 | Destabilizing | 0.035 | N | 0.491 | neutral | None | None | None | None | I |
S/M | 0.167 | likely_benign | 0.2294 | benign | 0.078 | Stabilizing | 0.555 | D | 0.398 | neutral | None | None | None | None | I |
S/N | 0.1127 | likely_benign | 0.1345 | benign | -0.207 | Destabilizing | 0.001 | N | 0.075 | neutral | None | None | None | None | I |
S/P | 0.875 | likely_pathogenic | 0.8759 | pathogenic | -0.287 | Destabilizing | 0.741 | D | 0.441 | neutral | N | 0.466009506 | None | None | I |
S/Q | 0.4043 | ambiguous | 0.5131 | ambiguous | -0.505 | Destabilizing | 0.555 | D | 0.387 | neutral | None | None | None | None | I |
S/R | 0.4611 | ambiguous | 0.5346 | ambiguous | -0.234 | Destabilizing | 0.555 | D | 0.451 | neutral | None | None | None | None | I |
S/T | 0.0831 | likely_benign | 0.0908 | benign | -0.309 | Destabilizing | 0.052 | N | 0.379 | neutral | N | 0.484768873 | None | None | I |
S/V | 0.1515 | likely_benign | 0.2193 | benign | -0.287 | Destabilizing | 0.081 | N | 0.521 | neutral | None | None | None | None | I |
S/W | 0.3012 | likely_benign | 0.4092 | ambiguous | -1.046 | Destabilizing | 0.824 | D | 0.504 | neutral | None | None | None | None | I |
S/Y | 0.1401 | likely_benign | 0.2079 | benign | -0.767 | Destabilizing | None | N | 0.303 | neutral | N | 0.489251973 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.