Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25337 | 76234;76235;76236 | chr2:178570123;178570122;178570121 | chr2:179434850;179434849;179434848 |
N2AB | 23696 | 71311;71312;71313 | chr2:178570123;178570122;178570121 | chr2:179434850;179434849;179434848 |
N2A | 22769 | 68530;68531;68532 | chr2:178570123;178570122;178570121 | chr2:179434850;179434849;179434848 |
N2B | 16272 | 49039;49040;49041 | chr2:178570123;178570122;178570121 | chr2:179434850;179434849;179434848 |
Novex-1 | 16397 | 49414;49415;49416 | chr2:178570123;178570122;178570121 | chr2:179434850;179434849;179434848 |
Novex-2 | 16464 | 49615;49616;49617 | chr2:178570123;178570122;178570121 | chr2:179434850;179434849;179434848 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | rs764447275 | -0.438 | 0.801 | N | 0.286 | 0.142 | 0.402899589544 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.57E-05 | 0 |
L/I | rs764447275 | -0.438 | 0.801 | N | 0.286 | 0.142 | 0.402899589544 | gnomAD-4.0.0 | 6.36734E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.14373E-05 | 0 | 0 |
L/P | None | None | 0.966 | N | 0.387 | 0.415 | 0.783275769904 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1002 | likely_benign | 0.125 | benign | -0.873 | Destabilizing | 0.525 | D | 0.305 | neutral | None | None | None | None | I |
L/C | 0.3469 | ambiguous | 0.4008 | ambiguous | -0.669 | Destabilizing | 0.998 | D | 0.351 | neutral | None | None | None | None | I |
L/D | 0.474 | ambiguous | 0.4787 | ambiguous | -0.339 | Destabilizing | 0.842 | D | 0.36 | neutral | None | None | None | None | I |
L/E | 0.2357 | likely_benign | 0.254 | benign | -0.419 | Destabilizing | 0.728 | D | 0.319 | neutral | None | None | None | None | I |
L/F | 0.1165 | likely_benign | 0.1365 | benign | -0.754 | Destabilizing | 0.966 | D | 0.387 | neutral | N | 0.494703733 | None | None | I |
L/G | 0.2897 | likely_benign | 0.3367 | benign | -1.071 | Destabilizing | 0.842 | D | 0.369 | neutral | None | None | None | None | I |
L/H | 0.1347 | likely_benign | 0.154 | benign | -0.245 | Destabilizing | 0.028 | N | 0.325 | neutral | N | 0.474219621 | None | None | I |
L/I | 0.0672 | likely_benign | 0.0768 | benign | -0.46 | Destabilizing | 0.801 | D | 0.286 | neutral | N | 0.43157468 | None | None | I |
L/K | 0.1793 | likely_benign | 0.1907 | benign | -0.52 | Destabilizing | 0.728 | D | 0.297 | neutral | None | None | None | None | I |
L/M | 0.0821 | likely_benign | 0.0994 | benign | -0.428 | Destabilizing | 0.991 | D | 0.4 | neutral | None | None | None | None | I |
L/N | 0.1841 | likely_benign | 0.2013 | benign | -0.29 | Destabilizing | 0.842 | D | 0.361 | neutral | None | None | None | None | I |
L/P | 0.5882 | likely_pathogenic | 0.5917 | pathogenic | -0.564 | Destabilizing | 0.966 | D | 0.387 | neutral | N | 0.506313528 | None | None | I |
L/Q | 0.0987 | likely_benign | 0.1107 | benign | -0.533 | Destabilizing | 0.172 | N | 0.266 | neutral | None | None | None | None | I |
L/R | 0.1453 | likely_benign | 0.1492 | benign | 0.107 | Stabilizing | 0.801 | D | 0.329 | neutral | N | 0.515267925 | None | None | I |
L/S | 0.1046 | likely_benign | 0.1247 | benign | -0.79 | Destabilizing | 0.728 | D | 0.299 | neutral | None | None | None | None | I |
L/T | 0.0705 | likely_benign | 0.0872 | benign | -0.76 | Destabilizing | 0.029 | N | 0.159 | neutral | None | None | None | None | I |
L/V | 0.0735 | likely_benign | 0.084 | benign | -0.564 | Destabilizing | 0.454 | N | 0.305 | neutral | N | 0.487907966 | None | None | I |
L/W | 0.2523 | likely_benign | 0.2604 | benign | -0.745 | Destabilizing | 0.998 | D | 0.39 | neutral | None | None | None | None | I |
L/Y | 0.2866 | likely_benign | 0.3185 | benign | -0.518 | Destabilizing | 0.949 | D | 0.371 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.