Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2533776234;76235;76236 chr2:178570123;178570122;178570121chr2:179434850;179434849;179434848
N2AB2369671311;71312;71313 chr2:178570123;178570122;178570121chr2:179434850;179434849;179434848
N2A2276968530;68531;68532 chr2:178570123;178570122;178570121chr2:179434850;179434849;179434848
N2B1627249039;49040;49041 chr2:178570123;178570122;178570121chr2:179434850;179434849;179434848
Novex-11639749414;49415;49416 chr2:178570123;178570122;178570121chr2:179434850;179434849;179434848
Novex-21646449615;49616;49617 chr2:178570123;178570122;178570121chr2:179434850;179434849;179434848
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-72
  • Domain position: 34
  • Structural Position: 36
  • Q(SASA): 0.4651
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/I rs764447275 -0.438 0.801 N 0.286 0.142 0.402899589544 gnomAD-2.1.1 1.61E-05 None None None None I None 0 0 None 0 0 None 0 None 0 3.57E-05 0
L/I rs764447275 -0.438 0.801 N 0.286 0.142 0.402899589544 gnomAD-4.0.0 6.36734E-06 None None None None I None 0 0 None 0 0 None 0 0 1.14373E-05 0 0
L/P None None 0.966 N 0.387 0.415 0.783275769904 gnomAD-4.0.0 1.20032E-06 None None None None I None 0 0 None 0 0 None 0 0 1.3125E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.1002 likely_benign 0.125 benign -0.873 Destabilizing 0.525 D 0.305 neutral None None None None I
L/C 0.3469 ambiguous 0.4008 ambiguous -0.669 Destabilizing 0.998 D 0.351 neutral None None None None I
L/D 0.474 ambiguous 0.4787 ambiguous -0.339 Destabilizing 0.842 D 0.36 neutral None None None None I
L/E 0.2357 likely_benign 0.254 benign -0.419 Destabilizing 0.728 D 0.319 neutral None None None None I
L/F 0.1165 likely_benign 0.1365 benign -0.754 Destabilizing 0.966 D 0.387 neutral N 0.494703733 None None I
L/G 0.2897 likely_benign 0.3367 benign -1.071 Destabilizing 0.842 D 0.369 neutral None None None None I
L/H 0.1347 likely_benign 0.154 benign -0.245 Destabilizing 0.028 N 0.325 neutral N 0.474219621 None None I
L/I 0.0672 likely_benign 0.0768 benign -0.46 Destabilizing 0.801 D 0.286 neutral N 0.43157468 None None I
L/K 0.1793 likely_benign 0.1907 benign -0.52 Destabilizing 0.728 D 0.297 neutral None None None None I
L/M 0.0821 likely_benign 0.0994 benign -0.428 Destabilizing 0.991 D 0.4 neutral None None None None I
L/N 0.1841 likely_benign 0.2013 benign -0.29 Destabilizing 0.842 D 0.361 neutral None None None None I
L/P 0.5882 likely_pathogenic 0.5917 pathogenic -0.564 Destabilizing 0.966 D 0.387 neutral N 0.506313528 None None I
L/Q 0.0987 likely_benign 0.1107 benign -0.533 Destabilizing 0.172 N 0.266 neutral None None None None I
L/R 0.1453 likely_benign 0.1492 benign 0.107 Stabilizing 0.801 D 0.329 neutral N 0.515267925 None None I
L/S 0.1046 likely_benign 0.1247 benign -0.79 Destabilizing 0.728 D 0.299 neutral None None None None I
L/T 0.0705 likely_benign 0.0872 benign -0.76 Destabilizing 0.029 N 0.159 neutral None None None None I
L/V 0.0735 likely_benign 0.084 benign -0.564 Destabilizing 0.454 N 0.305 neutral N 0.487907966 None None I
L/W 0.2523 likely_benign 0.2604 benign -0.745 Destabilizing 0.998 D 0.39 neutral None None None None I
L/Y 0.2866 likely_benign 0.3185 benign -0.518 Destabilizing 0.949 D 0.371 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.