Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25348 | 76267;76268;76269 | chr2:178570090;178570089;178570088 | chr2:179434817;179434816;179434815 |
N2AB | 23707 | 71344;71345;71346 | chr2:178570090;178570089;178570088 | chr2:179434817;179434816;179434815 |
N2A | 22780 | 68563;68564;68565 | chr2:178570090;178570089;178570088 | chr2:179434817;179434816;179434815 |
N2B | 16283 | 49072;49073;49074 | chr2:178570090;178570089;178570088 | chr2:179434817;179434816;179434815 |
Novex-1 | 16408 | 49447;49448;49449 | chr2:178570090;178570089;178570088 | chr2:179434817;179434816;179434815 |
Novex-2 | 16475 | 49648;49649;49650 | chr2:178570090;178570089;178570088 | chr2:179434817;179434816;179434815 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | None | None | 0.988 | N | 0.589 | 0.403 | 0.338834610459 | gnomAD-4.0.0 | 6.84352E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99598E-07 | 0 | 0 |
G/V | None | None | 0.988 | N | 0.683 | 0.438 | 0.495372917472 | gnomAD-4.0.0 | 6.84352E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.87413E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.295 | likely_benign | 0.2684 | benign | -0.445 | Destabilizing | 0.919 | D | 0.456 | neutral | N | 0.466503258 | None | None | N |
G/C | 0.5413 | ambiguous | 0.5346 | ambiguous | -0.905 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | N | 0.504486195 | None | None | N |
G/D | 0.8307 | likely_pathogenic | 0.8165 | pathogenic | -0.83 | Destabilizing | 0.988 | D | 0.589 | neutral | N | 0.508259021 | None | None | N |
G/E | 0.8539 | likely_pathogenic | 0.8345 | pathogenic | -0.995 | Destabilizing | 0.991 | D | 0.631 | neutral | None | None | None | None | N |
G/F | 0.9366 | likely_pathogenic | 0.9283 | pathogenic | -1.128 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
G/H | 0.8972 | likely_pathogenic | 0.8816 | pathogenic | -0.673 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
G/I | 0.8038 | likely_pathogenic | 0.7851 | pathogenic | -0.562 | Destabilizing | 0.999 | D | 0.732 | prob.delet. | None | None | None | None | N |
G/K | 0.9495 | likely_pathogenic | 0.9436 | pathogenic | -1.027 | Destabilizing | 0.991 | D | 0.627 | neutral | None | None | None | None | N |
G/L | 0.858 | likely_pathogenic | 0.8395 | pathogenic | -0.562 | Destabilizing | 0.991 | D | 0.677 | prob.neutral | None | None | None | None | N |
G/M | 0.8353 | likely_pathogenic | 0.8148 | pathogenic | -0.542 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
G/N | 0.6448 | likely_pathogenic | 0.6042 | pathogenic | -0.617 | Destabilizing | 0.991 | D | 0.634 | neutral | None | None | None | None | N |
G/P | 0.995 | likely_pathogenic | 0.9948 | pathogenic | -0.49 | Destabilizing | 0.995 | D | 0.667 | neutral | None | None | None | None | N |
G/Q | 0.8778 | likely_pathogenic | 0.8627 | pathogenic | -0.933 | Destabilizing | 0.991 | D | 0.693 | prob.neutral | None | None | None | None | N |
G/R | 0.9031 | likely_pathogenic | 0.8958 | pathogenic | -0.506 | Destabilizing | 0.988 | D | 0.677 | prob.neutral | N | 0.520305599 | None | None | N |
G/S | 0.197 | likely_benign | 0.1687 | benign | -0.742 | Destabilizing | 0.234 | N | 0.43 | neutral | N | 0.443380823 | None | None | N |
G/T | 0.4761 | ambiguous | 0.4296 | ambiguous | -0.845 | Destabilizing | 0.982 | D | 0.627 | neutral | None | None | None | None | N |
G/V | 0.6454 | likely_pathogenic | 0.6201 | pathogenic | -0.49 | Destabilizing | 0.988 | D | 0.683 | prob.neutral | N | 0.47658257 | None | None | N |
G/W | 0.895 | likely_pathogenic | 0.8875 | pathogenic | -1.267 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
G/Y | 0.8754 | likely_pathogenic | 0.8613 | pathogenic | -0.946 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.