Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25365 | 76318;76319;76320 | chr2:178570039;178570038;178570037 | chr2:179434766;179434765;179434764 |
N2AB | 23724 | 71395;71396;71397 | chr2:178570039;178570038;178570037 | chr2:179434766;179434765;179434764 |
N2A | 22797 | 68614;68615;68616 | chr2:178570039;178570038;178570037 | chr2:179434766;179434765;179434764 |
N2B | 16300 | 49123;49124;49125 | chr2:178570039;178570038;178570037 | chr2:179434766;179434765;179434764 |
Novex-1 | 16425 | 49498;49499;49500 | chr2:178570039;178570038;178570037 | chr2:179434766;179434765;179434764 |
Novex-2 | 16492 | 49699;49700;49701 | chr2:178570039;178570038;178570037 | chr2:179434766;179434765;179434764 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.008 | N | 0.391 | 0.184 | 0.421550847248 | gnomAD-4.0.0 | 1.59223E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43303E-05 | 0 |
R/K | None | None | 0.008 | N | 0.227 | 0.073 | 0.0762999501168 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8345 | likely_pathogenic | 0.8693 | pathogenic | -0.366 | Destabilizing | 0.415 | N | 0.611 | neutral | None | None | None | None | I |
R/C | 0.5121 | ambiguous | 0.5338 | ambiguous | -0.418 | Destabilizing | 0.996 | D | 0.717 | prob.delet. | None | None | None | None | I |
R/D | 0.956 | likely_pathogenic | 0.9678 | pathogenic | 0.028 | Stabilizing | 0.923 | D | 0.623 | neutral | None | None | None | None | I |
R/E | 0.805 | likely_pathogenic | 0.8494 | pathogenic | 0.114 | Stabilizing | 0.633 | D | 0.573 | neutral | None | None | None | None | I |
R/F | 0.917 | likely_pathogenic | 0.9239 | pathogenic | -0.485 | Destabilizing | 0.987 | D | 0.694 | prob.neutral | None | None | None | None | I |
R/G | 0.8021 | likely_pathogenic | 0.8405 | pathogenic | -0.607 | Destabilizing | 0.008 | N | 0.391 | neutral | N | 0.478041055 | None | None | I |
R/H | 0.2714 | likely_benign | 0.2857 | benign | -1.017 | Destabilizing | 0.961 | D | 0.655 | neutral | None | None | None | None | I |
R/I | 0.7205 | likely_pathogenic | 0.7666 | pathogenic | 0.248 | Stabilizing | 0.949 | D | 0.695 | prob.neutral | N | 0.464910323 | None | None | I |
R/K | 0.1266 | likely_benign | 0.179 | benign | -0.361 | Destabilizing | 0.008 | N | 0.227 | neutral | N | 0.424107203 | None | None | I |
R/L | 0.6376 | likely_pathogenic | 0.6584 | pathogenic | 0.248 | Stabilizing | 0.775 | D | 0.623 | neutral | None | None | None | None | I |
R/M | 0.6786 | likely_pathogenic | 0.7397 | pathogenic | -0.095 | Destabilizing | 0.996 | D | 0.668 | neutral | None | None | None | None | I |
R/N | 0.9156 | likely_pathogenic | 0.9406 | pathogenic | 0.017 | Stabilizing | 0.775 | D | 0.609 | neutral | None | None | None | None | I |
R/P | 0.8695 | likely_pathogenic | 0.8814 | pathogenic | 0.065 | Stabilizing | 0.961 | D | 0.707 | prob.neutral | None | None | None | None | I |
R/Q | 0.286 | likely_benign | 0.3033 | benign | -0.147 | Destabilizing | 0.858 | D | 0.633 | neutral | None | None | None | None | I |
R/S | 0.9043 | likely_pathogenic | 0.9294 | pathogenic | -0.57 | Destabilizing | 0.565 | D | 0.595 | neutral | N | 0.510379394 | None | None | I |
R/T | 0.7037 | likely_pathogenic | 0.7721 | pathogenic | -0.326 | Destabilizing | 0.722 | D | 0.625 | neutral | N | 0.444207543 | None | None | I |
R/V | 0.7547 | likely_pathogenic | 0.7966 | pathogenic | 0.065 | Stabilizing | 0.923 | D | 0.665 | neutral | None | None | None | None | I |
R/W | 0.5343 | ambiguous | 0.5231 | ambiguous | -0.358 | Destabilizing | 0.996 | D | 0.719 | prob.delet. | None | None | None | None | I |
R/Y | 0.8024 | likely_pathogenic | 0.8055 | pathogenic | 0.014 | Stabilizing | 0.987 | D | 0.7 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.