Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25384 | 76375;76376;76377 | chr2:178569982;178569981;178569980 | chr2:179434709;179434708;179434707 |
N2AB | 23743 | 71452;71453;71454 | chr2:178569982;178569981;178569980 | chr2:179434709;179434708;179434707 |
N2A | 22816 | 68671;68672;68673 | chr2:178569982;178569981;178569980 | chr2:179434709;179434708;179434707 |
N2B | 16319 | 49180;49181;49182 | chr2:178569982;178569981;178569980 | chr2:179434709;179434708;179434707 |
Novex-1 | 16444 | 49555;49556;49557 | chr2:178569982;178569981;178569980 | chr2:179434709;179434708;179434707 |
Novex-2 | 16511 | 49756;49757;49758 | chr2:178569982;178569981;178569980 | chr2:179434709;179434708;179434707 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 1.0 | N | 0.699 | 0.308 | 0.473538153929 | gnomAD-4.0.0 | 2.73967E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.60086E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5456 | ambiguous | 0.6155 | pathogenic | -0.844 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
A/D | 0.539 | ambiguous | 0.5663 | pathogenic | -0.474 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | D | 0.522463256 | None | None | I |
A/E | 0.3688 | ambiguous | 0.4008 | ambiguous | -0.628 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
A/F | 0.4079 | ambiguous | 0.449 | ambiguous | -0.88 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
A/G | 0.2251 | likely_benign | 0.2462 | benign | -0.316 | Destabilizing | 1.0 | D | 0.528 | neutral | N | 0.46437321 | None | None | I |
A/H | 0.5388 | ambiguous | 0.5915 | pathogenic | -0.283 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | I |
A/I | 0.1936 | likely_benign | 0.2277 | benign | -0.364 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
A/K | 0.4133 | ambiguous | 0.445 | ambiguous | -0.597 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
A/L | 0.1518 | likely_benign | 0.1842 | benign | -0.364 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | I |
A/M | 0.1858 | likely_benign | 0.2188 | benign | -0.403 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
A/N | 0.3255 | likely_benign | 0.3614 | ambiguous | -0.346 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
A/P | 0.5333 | ambiguous | 0.6183 | pathogenic | -0.302 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | N | 0.480473819 | None | None | I |
A/Q | 0.3516 | ambiguous | 0.3951 | ambiguous | -0.634 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
A/R | 0.3932 | ambiguous | 0.3959 | ambiguous | -0.112 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
A/S | 0.1298 | likely_benign | 0.1402 | benign | -0.553 | Destabilizing | 1.0 | D | 0.547 | neutral | N | 0.50522429 | None | None | I |
A/T | 0.1023 | likely_benign | 0.1201 | benign | -0.627 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | N | 0.471266653 | None | None | I |
A/V | 0.1108 | likely_benign | 0.1257 | benign | -0.302 | Destabilizing | 1.0 | D | 0.631 | neutral | N | 0.47278759 | None | None | I |
A/W | 0.8394 | likely_pathogenic | 0.8648 | pathogenic | -0.996 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
A/Y | 0.5682 | likely_pathogenic | 0.6069 | pathogenic | -0.654 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.