Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25393 | 76402;76403;76404 | chr2:178569955;178569954;178569953 | chr2:179434682;179434681;179434680 |
N2AB | 23752 | 71479;71480;71481 | chr2:178569955;178569954;178569953 | chr2:179434682;179434681;179434680 |
N2A | 22825 | 68698;68699;68700 | chr2:178569955;178569954;178569953 | chr2:179434682;179434681;179434680 |
N2B | 16328 | 49207;49208;49209 | chr2:178569955;178569954;178569953 | chr2:179434682;179434681;179434680 |
Novex-1 | 16453 | 49582;49583;49584 | chr2:178569955;178569954;178569953 | chr2:179434682;179434681;179434680 |
Novex-2 | 16520 | 49783;49784;49785 | chr2:178569955;178569954;178569953 | chr2:179434682;179434681;179434680 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1005590673 | None | 0.18 | N | 0.372 | 0.164 | 0.165133752707 | gnomAD-4.0.0 | 3.18885E-06 | None | None | None | None | N | None | 0 | 4.57917E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0486 | likely_benign | 0.0512 | benign | -1.587 | Destabilizing | 0.087 | N | 0.344 | neutral | N | 0.470647569 | None | None | N |
P/C | 0.2989 | likely_benign | 0.3226 | benign | -0.921 | Destabilizing | 0.999 | D | 0.735 | deleterious | None | None | None | None | N |
P/D | 0.7101 | likely_pathogenic | 0.6843 | pathogenic | -1.4 | Destabilizing | 0.971 | D | 0.536 | neutral | None | None | None | None | N |
P/E | 0.4049 | ambiguous | 0.3899 | ambiguous | -1.391 | Destabilizing | 0.971 | D | 0.585 | neutral | None | None | None | None | N |
P/F | 0.4879 | ambiguous | 0.4596 | ambiguous | -1.27 | Destabilizing | 0.999 | D | 0.732 | deleterious | None | None | None | None | N |
P/G | 0.3181 | likely_benign | 0.3191 | benign | -1.91 | Destabilizing | 0.825 | D | 0.559 | neutral | None | None | None | None | N |
P/H | 0.3052 | likely_benign | 0.2819 | benign | -1.443 | Destabilizing | 0.998 | D | 0.667 | prob.neutral | N | 0.50310707 | None | None | N |
P/I | 0.1819 | likely_benign | 0.1722 | benign | -0.793 | Destabilizing | 0.985 | D | 0.746 | deleterious | None | None | None | None | N |
P/K | 0.4008 | ambiguous | 0.4038 | ambiguous | -1.142 | Destabilizing | 0.971 | D | 0.565 | neutral | None | None | None | None | N |
P/L | 0.1253 | likely_benign | 0.116 | benign | -0.793 | Destabilizing | 0.961 | D | 0.701 | prob.delet. | N | 0.475631064 | None | None | N |
P/M | 0.2696 | likely_benign | 0.2768 | benign | -0.56 | Destabilizing | 0.999 | D | 0.659 | prob.neutral | None | None | None | None | N |
P/N | 0.4744 | ambiguous | 0.4604 | ambiguous | -0.948 | Destabilizing | 0.971 | D | 0.686 | prob.delet. | None | None | None | None | N |
P/Q | 0.2205 | likely_benign | 0.2137 | benign | -1.13 | Destabilizing | 0.985 | D | 0.527 | neutral | None | None | None | None | N |
P/R | 0.2859 | likely_benign | 0.2653 | benign | -0.631 | Destabilizing | 0.961 | D | 0.686 | prob.delet. | N | 0.502346601 | None | None | N |
P/S | 0.1195 | likely_benign | 0.1158 | benign | -1.482 | Destabilizing | 0.18 | N | 0.372 | neutral | N | 0.506280296 | None | None | N |
P/T | 0.0942 | likely_benign | 0.0921 | benign | -1.367 | Destabilizing | 0.78 | D | 0.564 | neutral | N | 0.500815761 | None | None | N |
P/V | 0.1151 | likely_benign | 0.1121 | benign | -1.024 | Destabilizing | 0.971 | D | 0.637 | neutral | None | None | None | None | N |
P/W | 0.7183 | likely_pathogenic | 0.7059 | pathogenic | -1.47 | Destabilizing | 0.999 | D | 0.665 | prob.neutral | None | None | None | None | N |
P/Y | 0.5191 | ambiguous | 0.5136 | ambiguous | -1.167 | Destabilizing | 0.999 | D | 0.731 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.