Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25438 | 76537;76538;76539 | chr2:178569820;178569819;178569818 | chr2:179434547;179434546;179434545 |
N2AB | 23797 | 71614;71615;71616 | chr2:178569820;178569819;178569818 | chr2:179434547;179434546;179434545 |
N2A | 22870 | 68833;68834;68835 | chr2:178569820;178569819;178569818 | chr2:179434547;179434546;179434545 |
N2B | 16373 | 49342;49343;49344 | chr2:178569820;178569819;178569818 | chr2:179434547;179434546;179434545 |
Novex-1 | 16498 | 49717;49718;49719 | chr2:178569820;178569819;178569818 | chr2:179434547;179434546;179434545 |
Novex-2 | 16565 | 49918;49919;49920 | chr2:178569820;178569819;178569818 | chr2:179434547;179434546;179434545 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/P | rs1707482810 | None | 0.979 | N | 0.423 | 0.393 | 0.4018988957 | gnomAD-4.0.0 | 1.5919E-06 | None | None | None | None | I | None | 0 | 2.28697E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1925 | likely_benign | 0.1945 | benign | -0.409 | Destabilizing | 0.742 | D | 0.399 | neutral | None | None | None | None | I |
Q/C | 0.4646 | ambiguous | 0.4679 | ambiguous | 0.184 | Stabilizing | 0.996 | D | 0.514 | neutral | None | None | None | None | I |
Q/D | 0.3608 | ambiguous | 0.356 | ambiguous | -0.096 | Destabilizing | 0.009 | N | 0.143 | neutral | None | None | None | None | I |
Q/E | 0.0744 | likely_benign | 0.0748 | benign | -0.09 | Destabilizing | 0.309 | N | 0.41 | neutral | N | 0.47626682 | None | None | I |
Q/F | 0.5754 | likely_pathogenic | 0.5794 | pathogenic | -0.394 | Destabilizing | 0.91 | D | 0.495 | neutral | None | None | None | None | I |
Q/G | 0.2861 | likely_benign | 0.2898 | benign | -0.664 | Destabilizing | 0.854 | D | 0.415 | neutral | None | None | None | None | I |
Q/H | 0.1765 | likely_benign | 0.1752 | benign | -0.568 | Destabilizing | 0.979 | D | 0.419 | neutral | N | 0.488169593 | None | None | I |
Q/I | 0.2369 | likely_benign | 0.2336 | benign | 0.193 | Stabilizing | 0.835 | D | 0.434 | neutral | None | None | None | None | I |
Q/K | 0.0758 | likely_benign | 0.0765 | benign | -0.088 | Destabilizing | 0.815 | D | 0.423 | neutral | N | 0.444386475 | None | None | I |
Q/L | 0.0846 | likely_benign | 0.0849 | benign | 0.193 | Stabilizing | 0.007 | N | 0.249 | neutral | N | 0.42995574 | None | None | I |
Q/M | 0.2628 | likely_benign | 0.2701 | benign | 0.598 | Stabilizing | 0.91 | D | 0.421 | neutral | None | None | None | None | I |
Q/N | 0.2768 | likely_benign | 0.2793 | benign | -0.427 | Destabilizing | 0.742 | D | 0.389 | neutral | None | None | None | None | I |
Q/P | 0.4337 | ambiguous | 0.5119 | ambiguous | 0.022 | Stabilizing | 0.979 | D | 0.423 | neutral | N | 0.477066777 | None | None | I |
Q/R | 0.09 | likely_benign | 0.089 | benign | 0.062 | Stabilizing | 0.815 | D | 0.441 | neutral | N | 0.460356005 | None | None | I |
Q/S | 0.2204 | likely_benign | 0.2233 | benign | -0.482 | Destabilizing | 0.742 | D | 0.375 | neutral | None | None | None | None | I |
Q/T | 0.1253 | likely_benign | 0.1257 | benign | -0.303 | Destabilizing | 0.742 | D | 0.391 | neutral | None | None | None | None | I |
Q/V | 0.1747 | likely_benign | 0.1759 | benign | 0.022 | Stabilizing | 0.59 | D | 0.413 | neutral | None | None | None | None | I |
Q/W | 0.4582 | ambiguous | 0.4568 | ambiguous | -0.293 | Destabilizing | 0.996 | D | 0.563 | neutral | None | None | None | None | I |
Q/Y | 0.3895 | ambiguous | 0.397 | ambiguous | -0.079 | Destabilizing | 0.953 | D | 0.449 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.