Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2544 | 7855;7856;7857 | chr2:178773334;178773333;178773332 | chr2:179638061;179638060;179638059 |
N2AB | 2544 | 7855;7856;7857 | chr2:178773334;178773333;178773332 | chr2:179638061;179638060;179638059 |
N2A | 2544 | 7855;7856;7857 | chr2:178773334;178773333;178773332 | chr2:179638061;179638060;179638059 |
N2B | 2498 | 7717;7718;7719 | chr2:178773334;178773333;178773332 | chr2:179638061;179638060;179638059 |
Novex-1 | 2498 | 7717;7718;7719 | chr2:178773334;178773333;178773332 | chr2:179638061;179638060;179638059 |
Novex-2 | 2498 | 7717;7718;7719 | chr2:178773334;178773333;178773332 | chr2:179638061;179638060;179638059 |
Novex-3 | 2544 | 7855;7856;7857 | chr2:178773334;178773333;178773332 | chr2:179638061;179638060;179638059 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | rs1271799350 | None | 1.0 | D | 0.727 | 0.624 | 0.808542943238 | gnomAD-4.0.0 | 1.59084E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85672E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.3856 | ambiguous | 0.3862 | ambiguous | -1.213 | Destabilizing | 0.998 | D | 0.499 | neutral | None | None | None | None | N |
C/D | 0.9088 | likely_pathogenic | 0.8878 | pathogenic | 0.03 | Stabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
C/E | 0.9443 | likely_pathogenic | 0.9329 | pathogenic | 0.065 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
C/F | 0.5028 | ambiguous | 0.4704 | ambiguous | -0.861 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | D | 0.581506638 | None | None | N |
C/G | 0.2385 | likely_benign | 0.2247 | benign | -1.456 | Destabilizing | 1.0 | D | 0.761 | deleterious | D | 0.540095777 | None | None | N |
C/H | 0.8368 | likely_pathogenic | 0.8108 | pathogenic | -1.567 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
C/I | 0.6508 | likely_pathogenic | 0.6349 | pathogenic | -0.627 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
C/K | 0.9358 | likely_pathogenic | 0.9235 | pathogenic | -0.487 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
C/L | 0.7029 | likely_pathogenic | 0.6796 | pathogenic | -0.627 | Destabilizing | 0.999 | D | 0.599 | neutral | None | None | None | None | N |
C/M | 0.8004 | likely_pathogenic | 0.7923 | pathogenic | 0.041 | Stabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
C/N | 0.7986 | likely_pathogenic | 0.7715 | pathogenic | -0.276 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
C/P | 0.9888 | likely_pathogenic | 0.9851 | pathogenic | -0.796 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
C/Q | 0.8519 | likely_pathogenic | 0.8414 | pathogenic | -0.333 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
C/R | 0.7244 | likely_pathogenic | 0.6893 | pathogenic | -0.286 | Destabilizing | 1.0 | D | 0.747 | deleterious | D | 0.581653883 | None | None | N |
C/S | 0.3501 | ambiguous | 0.3457 | ambiguous | -0.789 | Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.501156472 | None | None | N |
C/T | 0.535 | ambiguous | 0.5247 | ambiguous | -0.592 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
C/V | 0.4811 | ambiguous | 0.4753 | ambiguous | -0.796 | Destabilizing | 0.999 | D | 0.686 | prob.neutral | None | None | None | None | N |
C/W | 0.8732 | likely_pathogenic | 0.8569 | pathogenic | -0.822 | Destabilizing | 1.0 | D | 0.661 | neutral | D | 0.583316423 | None | None | N |
C/Y | 0.6772 | likely_pathogenic | 0.6361 | pathogenic | -0.757 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | D | 0.581653883 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.