Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25447 | 76564;76565;76566 | chr2:178569793;178569792;178569791 | chr2:179434520;179434519;179434518 |
N2AB | 23806 | 71641;71642;71643 | chr2:178569793;178569792;178569791 | chr2:179434520;179434519;179434518 |
N2A | 22879 | 68860;68861;68862 | chr2:178569793;178569792;178569791 | chr2:179434520;179434519;179434518 |
N2B | 16382 | 49369;49370;49371 | chr2:178569793;178569792;178569791 | chr2:179434520;179434519;179434518 |
Novex-1 | 16507 | 49744;49745;49746 | chr2:178569793;178569792;178569791 | chr2:179434520;179434519;179434518 |
Novex-2 | 16574 | 49945;49946;49947 | chr2:178569793;178569792;178569791 | chr2:179434520;179434519;179434518 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs374106281 | -0.506 | None | N | 0.141 | 0.106 | 0.278143212241 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
V/L | rs374106281 | -0.506 | None | N | 0.141 | 0.106 | 0.278143212241 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/L | rs374106281 | -0.506 | None | N | 0.141 | 0.106 | 0.278143212241 | gnomAD-4.0.0 | 1.30178E-05 | None | None | None | None | N | None | 0 | 1.66789E-05 | None | 0 | 0 | None | 0 | 0 | 1.6955E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0842 | likely_benign | 0.0871 | benign | -1.29 | Destabilizing | None | N | 0.15 | neutral | N | 0.423973917 | None | None | N |
V/C | 0.5019 | ambiguous | 0.5393 | ambiguous | -0.762 | Destabilizing | 0.356 | N | 0.397 | neutral | None | None | None | None | N |
V/D | 0.1986 | likely_benign | 0.1859 | benign | -1.0 | Destabilizing | 0.072 | N | 0.502 | neutral | None | None | None | None | N |
V/E | 0.1984 | likely_benign | 0.1867 | benign | -1.066 | Destabilizing | 0.055 | N | 0.449 | neutral | N | 0.499047679 | None | None | N |
V/F | 0.1416 | likely_benign | 0.1398 | benign | -1.272 | Destabilizing | 0.214 | N | 0.423 | neutral | None | None | None | None | N |
V/G | 0.1136 | likely_benign | 0.1075 | benign | -1.532 | Destabilizing | None | N | 0.267 | neutral | N | 0.456606411 | None | None | N |
V/H | 0.3597 | ambiguous | 0.3702 | ambiguous | -1.032 | Destabilizing | 0.864 | D | 0.475 | neutral | None | None | None | None | N |
V/I | 0.0708 | likely_benign | 0.0728 | benign | -0.754 | Destabilizing | 0.016 | N | 0.274 | neutral | None | None | None | None | N |
V/K | 0.1655 | likely_benign | 0.167 | benign | -0.882 | Destabilizing | 0.072 | N | 0.449 | neutral | None | None | None | None | N |
V/L | 0.1202 | likely_benign | 0.1315 | benign | -0.754 | Destabilizing | None | N | 0.141 | neutral | N | 0.467148691 | None | None | N |
V/M | 0.1006 | likely_benign | 0.1043 | benign | -0.438 | Destabilizing | 0.171 | N | 0.331 | neutral | N | 0.484423838 | None | None | N |
V/N | 0.1271 | likely_benign | 0.1376 | benign | -0.566 | Destabilizing | 0.072 | N | 0.48 | neutral | None | None | None | None | N |
V/P | 0.2306 | likely_benign | 0.2557 | benign | -0.897 | Destabilizing | 0.356 | N | 0.493 | neutral | None | None | None | None | N |
V/Q | 0.2136 | likely_benign | 0.2169 | benign | -0.846 | Destabilizing | 0.356 | N | 0.499 | neutral | None | None | None | None | N |
V/R | 0.1739 | likely_benign | 0.1704 | benign | -0.289 | Destabilizing | 0.214 | N | 0.501 | neutral | None | None | None | None | N |
V/S | 0.1038 | likely_benign | 0.109 | benign | -1.052 | Destabilizing | 0.003 | N | 0.318 | neutral | None | None | None | None | N |
V/T | 0.0914 | likely_benign | 0.1051 | benign | -1.017 | Destabilizing | None | N | 0.158 | neutral | None | None | None | None | N |
V/W | 0.712 | likely_pathogenic | 0.7213 | pathogenic | -1.36 | Destabilizing | 0.864 | D | 0.501 | neutral | None | None | None | None | N |
V/Y | 0.364 | ambiguous | 0.379 | ambiguous | -1.081 | Destabilizing | 0.356 | N | 0.407 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.