Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2545 | 7858;7859;7860 | chr2:178773331;178773330;178773329 | chr2:179638058;179638057;179638056 |
N2AB | 2545 | 7858;7859;7860 | chr2:178773331;178773330;178773329 | chr2:179638058;179638057;179638056 |
N2A | 2545 | 7858;7859;7860 | chr2:178773331;178773330;178773329 | chr2:179638058;179638057;179638056 |
N2B | 2499 | 7720;7721;7722 | chr2:178773331;178773330;178773329 | chr2:179638058;179638057;179638056 |
Novex-1 | 2499 | 7720;7721;7722 | chr2:178773331;178773330;178773329 | chr2:179638058;179638057;179638056 |
Novex-2 | 2499 | 7720;7721;7722 | chr2:178773331;178773330;178773329 | chr2:179638058;179638057;179638056 |
Novex-3 | 2545 | 7858;7859;7860 | chr2:178773331;178773330;178773329 | chr2:179638058;179638057;179638056 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs761827668 | -0.717 | 0.201 | N | 0.317 | 0.172 | 0.166414681773 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
T/A | rs761827668 | -0.717 | 0.201 | N | 0.317 | 0.172 | 0.166414681773 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/A | rs761827668 | -0.717 | 0.201 | N | 0.317 | 0.172 | 0.166414681773 | gnomAD-4.0.0 | 2.56155E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78357E-06 | 0 | 0 |
T/I | rs1016165797 | -0.161 | 0.379 | N | 0.359 | 0.405 | 0.405700215632 | gnomAD-2.1.1 | 1.06E-05 | None | None | None | None | N | None | 0 | 2.83E-05 | None | 0 | 0 | None | 0 | None | 0 | 1.55E-05 | 0 |
T/I | rs1016165797 | -0.161 | 0.379 | N | 0.359 | 0.405 | 0.405700215632 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
T/I | rs1016165797 | -0.161 | 0.379 | N | 0.359 | 0.405 | 0.405700215632 | gnomAD-4.0.0 | 1.67306E-05 | None | None | None | None | N | None | 0 | 1.66756E-05 | None | 0 | 0 | None | 0 | 0 | 2.11869E-05 | 0 | 1.60056E-05 |
T/R | None | None | 0.81 | N | 0.381 | 0.454 | 0.610832418033 | gnomAD-4.0.0 | 1.36826E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79863E-06 | 0 | 0 |
T/S | rs761827668 | -0.764 | 0.007 | N | 0.213 | 0.094 | 0.128392430309 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
T/S | rs761827668 | -0.764 | 0.007 | N | 0.213 | 0.094 | 0.128392430309 | gnomAD-4.0.0 | 1.59081E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1175 | likely_benign | 0.1372 | benign | -0.355 | Destabilizing | 0.201 | N | 0.317 | neutral | N | 0.508829196 | None | None | N |
T/C | 0.6431 | likely_pathogenic | 0.7035 | pathogenic | -0.257 | Destabilizing | 0.992 | D | 0.399 | neutral | None | None | None | None | N |
T/D | 0.5443 | ambiguous | 0.6428 | pathogenic | -0.028 | Destabilizing | 0.617 | D | 0.367 | neutral | None | None | None | None | N |
T/E | 0.3921 | ambiguous | 0.4563 | ambiguous | -0.105 | Destabilizing | 0.617 | D | 0.379 | neutral | None | None | None | None | N |
T/F | 0.3804 | ambiguous | 0.4865 | ambiguous | -0.789 | Destabilizing | 0.85 | D | 0.522 | neutral | None | None | None | None | N |
T/G | 0.3779 | ambiguous | 0.4602 | ambiguous | -0.496 | Destabilizing | 0.447 | N | 0.445 | neutral | None | None | None | None | N |
T/H | 0.4007 | ambiguous | 0.4733 | ambiguous | -0.821 | Destabilizing | 0.977 | D | 0.521 | neutral | None | None | None | None | N |
T/I | 0.308 | likely_benign | 0.3706 | ambiguous | -0.102 | Destabilizing | 0.379 | N | 0.359 | neutral | N | 0.508354036 | None | None | N |
T/K | 0.2345 | likely_benign | 0.2814 | benign | -0.471 | Destabilizing | 0.379 | N | 0.373 | neutral | N | 0.46749623 | None | None | N |
T/L | 0.1359 | likely_benign | 0.1693 | benign | -0.102 | Destabilizing | 0.25 | N | 0.344 | neutral | None | None | None | None | N |
T/M | 0.1232 | likely_benign | 0.1439 | benign | 0.11 | Stabilizing | 0.127 | N | 0.346 | neutral | None | None | None | None | N |
T/N | 0.1964 | likely_benign | 0.2522 | benign | -0.228 | Destabilizing | 0.447 | N | 0.329 | neutral | None | None | None | None | N |
T/P | 0.1948 | likely_benign | 0.2213 | benign | -0.157 | Destabilizing | 0.896 | D | 0.381 | neutral | N | 0.511413645 | None | None | N |
T/Q | 0.3018 | likely_benign | 0.3472 | ambiguous | -0.49 | Destabilizing | 0.85 | D | 0.397 | neutral | None | None | None | None | N |
T/R | 0.2121 | likely_benign | 0.2517 | benign | -0.168 | Destabilizing | 0.81 | D | 0.381 | neutral | N | 0.508829196 | None | None | N |
T/S | 0.1475 | likely_benign | 0.1826 | benign | -0.418 | Destabilizing | 0.007 | N | 0.213 | neutral | N | 0.492192094 | None | None | N |
T/V | 0.234 | likely_benign | 0.2777 | benign | -0.157 | Destabilizing | 0.447 | N | 0.29 | neutral | None | None | None | None | N |
T/W | 0.7308 | likely_pathogenic | 0.7939 | pathogenic | -0.785 | Destabilizing | 0.992 | D | 0.571 | neutral | None | None | None | None | N |
T/Y | 0.4421 | ambiguous | 0.5292 | ambiguous | -0.517 | Destabilizing | 0.972 | D | 0.523 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.