Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25451 | 76576;76577;76578 | chr2:178569781;178569780;178569779 | chr2:179434508;179434507;179434506 |
N2AB | 23810 | 71653;71654;71655 | chr2:178569781;178569780;178569779 | chr2:179434508;179434507;179434506 |
N2A | 22883 | 68872;68873;68874 | chr2:178569781;178569780;178569779 | chr2:179434508;179434507;179434506 |
N2B | 16386 | 49381;49382;49383 | chr2:178569781;178569780;178569779 | chr2:179434508;179434507;179434506 |
Novex-1 | 16511 | 49756;49757;49758 | chr2:178569781;178569780;178569779 | chr2:179434508;179434507;179434506 |
Novex-2 | 16578 | 49957;49958;49959 | chr2:178569781;178569780;178569779 | chr2:179434508;179434507;179434506 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.822 | N | 0.483 | 0.331 | 0.371344866733 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1761 | likely_benign | 0.1584 | benign | -0.441 | Destabilizing | 0.822 | D | 0.545 | neutral | N | 0.471332786 | None | None | I |
E/C | 0.7719 | likely_pathogenic | 0.7195 | pathogenic | -0.185 | Destabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | I |
E/D | 0.0978 | likely_benign | 0.0805 | benign | -0.283 | Destabilizing | 0.006 | N | 0.372 | neutral | N | 0.503242777 | None | None | I |
E/F | 0.6692 | likely_pathogenic | 0.6136 | pathogenic | -0.251 | Destabilizing | 0.998 | D | 0.66 | neutral | None | None | None | None | I |
E/G | 0.1783 | likely_benign | 0.1651 | benign | -0.636 | Destabilizing | 0.822 | D | 0.483 | neutral | N | 0.520116385 | None | None | I |
E/H | 0.4008 | ambiguous | 0.3576 | ambiguous | 0.094 | Stabilizing | 0.998 | D | 0.561 | neutral | None | None | None | None | I |
E/I | 0.2701 | likely_benign | 0.2369 | benign | 0.041 | Stabilizing | 0.978 | D | 0.672 | neutral | None | None | None | None | I |
E/K | 0.12 | likely_benign | 0.1224 | benign | 0.2 | Stabilizing | 0.822 | D | 0.528 | neutral | N | 0.509592747 | None | None | I |
E/L | 0.3368 | likely_benign | 0.2965 | benign | 0.041 | Stabilizing | 0.978 | D | 0.653 | neutral | None | None | None | None | I |
E/M | 0.3746 | ambiguous | 0.3399 | benign | 0.064 | Stabilizing | 0.998 | D | 0.619 | neutral | None | None | None | None | I |
E/N | 0.1701 | likely_benign | 0.1431 | benign | -0.112 | Destabilizing | 0.915 | D | 0.512 | neutral | None | None | None | None | I |
E/P | 0.6642 | likely_pathogenic | 0.5682 | pathogenic | -0.1 | Destabilizing | 0.978 | D | 0.547 | neutral | None | None | None | None | I |
E/Q | 0.1315 | likely_benign | 0.1288 | benign | -0.065 | Destabilizing | 0.942 | D | 0.499 | neutral | N | 0.489564191 | None | None | I |
E/R | 0.2495 | likely_benign | 0.2481 | benign | 0.486 | Stabilizing | 0.978 | D | 0.546 | neutral | None | None | None | None | I |
E/S | 0.1793 | likely_benign | 0.1562 | benign | -0.293 | Destabilizing | 0.754 | D | 0.526 | neutral | None | None | None | None | I |
E/T | 0.1878 | likely_benign | 0.172 | benign | -0.13 | Destabilizing | 0.956 | D | 0.534 | neutral | None | None | None | None | I |
E/V | 0.1781 | likely_benign | 0.1589 | benign | -0.1 | Destabilizing | 0.971 | D | 0.598 | neutral | N | 0.520772532 | None | None | I |
E/W | 0.8772 | likely_pathogenic | 0.8476 | pathogenic | -0.075 | Destabilizing | 0.998 | D | 0.717 | prob.delet. | None | None | None | None | I |
E/Y | 0.5424 | ambiguous | 0.4821 | ambiguous | -0.006 | Destabilizing | 0.998 | D | 0.604 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.