Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25467 | 76624;76625;76626 | chr2:178569733;178569732;178569731 | chr2:179434460;179434459;179434458 |
N2AB | 23826 | 71701;71702;71703 | chr2:178569733;178569732;178569731 | chr2:179434460;179434459;179434458 |
N2A | 22899 | 68920;68921;68922 | chr2:178569733;178569732;178569731 | chr2:179434460;179434459;179434458 |
N2B | 16402 | 49429;49430;49431 | chr2:178569733;178569732;178569731 | chr2:179434460;179434459;179434458 |
Novex-1 | 16527 | 49804;49805;49806 | chr2:178569733;178569732;178569731 | chr2:179434460;179434459;179434458 |
Novex-2 | 16594 | 50005;50006;50007 | chr2:178569733;178569732;178569731 | chr2:179434460;179434459;179434458 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs758729188 | -0.084 | 0.014 | N | 0.347 | 0.175 | 0.21737058555 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
E/K | rs758729188 | -0.084 | 0.014 | N | 0.347 | 0.175 | 0.21737058555 | gnomAD-4.0.0 | 1.27406E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.00333E-04 | 3.02755E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1308 | likely_benign | 0.1196 | benign | -0.976 | Destabilizing | 0.698 | D | 0.575 | neutral | N | 0.452333954 | None | None | N |
E/C | 0.7152 | likely_pathogenic | 0.688 | pathogenic | -0.427 | Destabilizing | 0.998 | D | 0.748 | deleterious | None | None | None | None | N |
E/D | 0.3013 | likely_benign | 0.259 | benign | -0.665 | Destabilizing | 0.822 | D | 0.501 | neutral | N | 0.466167256 | None | None | N |
E/F | 0.7425 | likely_pathogenic | 0.6812 | pathogenic | -0.35 | Destabilizing | 0.993 | D | 0.761 | deleterious | None | None | None | None | N |
E/G | 0.2824 | likely_benign | 0.2439 | benign | -1.279 | Destabilizing | 0.822 | D | 0.647 | neutral | N | 0.489564191 | None | None | N |
E/H | 0.4529 | ambiguous | 0.3937 | ambiguous | -0.268 | Destabilizing | 0.994 | D | 0.579 | neutral | None | None | None | None | N |
E/I | 0.2486 | likely_benign | 0.2196 | benign | -0.16 | Destabilizing | 0.956 | D | 0.754 | deleterious | None | None | None | None | N |
E/K | 0.1194 | likely_benign | 0.1008 | benign | -0.132 | Destabilizing | 0.014 | N | 0.347 | neutral | N | 0.445175909 | None | None | N |
E/L | 0.3136 | likely_benign | 0.2664 | benign | -0.16 | Destabilizing | 0.86 | D | 0.662 | neutral | None | None | None | None | N |
E/M | 0.3359 | likely_benign | 0.2905 | benign | 0.149 | Stabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | N |
E/N | 0.3536 | ambiguous | 0.311 | benign | -0.777 | Destabilizing | 0.956 | D | 0.549 | neutral | None | None | None | None | N |
E/P | 0.5268 | ambiguous | 0.4782 | ambiguous | -0.413 | Destabilizing | 0.978 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/Q | 0.1238 | likely_benign | 0.1149 | benign | -0.671 | Destabilizing | 0.942 | D | 0.534 | neutral | N | 0.456296979 | None | None | N |
E/R | 0.2321 | likely_benign | 0.1942 | benign | 0.211 | Stabilizing | 0.754 | D | 0.523 | neutral | None | None | None | None | N |
E/S | 0.2494 | likely_benign | 0.224 | benign | -0.991 | Destabilizing | 0.754 | D | 0.495 | neutral | None | None | None | None | N |
E/T | 0.1728 | likely_benign | 0.1581 | benign | -0.723 | Destabilizing | 0.076 | N | 0.331 | neutral | None | None | None | None | N |
E/V | 0.1484 | likely_benign | 0.1353 | benign | -0.413 | Destabilizing | 0.822 | D | 0.653 | neutral | N | 0.437633861 | None | None | N |
E/W | 0.9233 | likely_pathogenic | 0.8846 | pathogenic | 0.03 | Stabilizing | 0.998 | D | 0.728 | prob.delet. | None | None | None | None | N |
E/Y | 0.6529 | likely_pathogenic | 0.5837 | pathogenic | -0.056 | Destabilizing | 0.993 | D | 0.755 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.