Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25476 | 76651;76652;76653 | chr2:178569706;178569705;178569704 | chr2:179434433;179434432;179434431 |
N2AB | 23835 | 71728;71729;71730 | chr2:178569706;178569705;178569704 | chr2:179434433;179434432;179434431 |
N2A | 22908 | 68947;68948;68949 | chr2:178569706;178569705;178569704 | chr2:179434433;179434432;179434431 |
N2B | 16411 | 49456;49457;49458 | chr2:178569706;178569705;178569704 | chr2:179434433;179434432;179434431 |
Novex-1 | 16536 | 49831;49832;49833 | chr2:178569706;178569705;178569704 | chr2:179434433;179434432;179434431 |
Novex-2 | 16603 | 50032;50033;50034 | chr2:178569706;178569705;178569704 | chr2:179434433;179434432;179434431 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.958 | N | 0.403 | 0.21 | 0.303781844768 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/K | rs868426391 | None | 0.958 | N | 0.464 | 0.284 | 0.295623431141 | gnomAD-4.0.0 | 1.36908E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.31587E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1242 | likely_benign | 0.12 | benign | -1.047 | Destabilizing | 0.919 | D | 0.541 | neutral | N | 0.479650898 | None | None | N |
E/C | 0.7568 | likely_pathogenic | 0.7509 | pathogenic | -0.633 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
E/D | 0.2633 | likely_benign | 0.2642 | benign | -1.337 | Destabilizing | 0.958 | D | 0.403 | neutral | N | 0.47321889 | None | None | N |
E/F | 0.7489 | likely_pathogenic | 0.7515 | pathogenic | -0.437 | Destabilizing | 0.995 | D | 0.801 | deleterious | None | None | None | None | N |
E/G | 0.1845 | likely_benign | 0.178 | benign | -1.478 | Destabilizing | 0.988 | D | 0.722 | prob.delet. | N | 0.488311405 | None | None | N |
E/H | 0.4378 | ambiguous | 0.4184 | ambiguous | -0.809 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/I | 0.3098 | likely_benign | 0.3077 | benign | 0.161 | Stabilizing | 0.991 | D | 0.805 | deleterious | None | None | None | None | N |
E/K | 0.1089 | likely_benign | 0.1075 | benign | -1.203 | Destabilizing | 0.958 | D | 0.464 | neutral | N | 0.475318804 | None | None | N |
E/L | 0.3724 | ambiguous | 0.3621 | ambiguous | 0.161 | Stabilizing | 0.982 | D | 0.742 | deleterious | None | None | None | None | N |
E/M | 0.3749 | ambiguous | 0.366 | ambiguous | 0.803 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
E/N | 0.3024 | likely_benign | 0.3009 | benign | -1.596 | Destabilizing | 0.991 | D | 0.657 | neutral | None | None | None | None | N |
E/P | 0.445 | ambiguous | 0.449 | ambiguous | -0.222 | Destabilizing | 0.995 | D | 0.801 | deleterious | None | None | None | None | N |
E/Q | 0.103 | likely_benign | 0.0988 | benign | -1.363 | Destabilizing | 0.994 | D | 0.609 | neutral | N | 0.470243149 | None | None | N |
E/R | 0.2103 | likely_benign | 0.2019 | benign | -0.972 | Destabilizing | 0.991 | D | 0.688 | prob.neutral | None | None | None | None | N |
E/S | 0.1863 | likely_benign | 0.1856 | benign | -2.099 | Highly Destabilizing | 0.938 | D | 0.478 | neutral | None | None | None | None | N |
E/T | 0.176 | likely_benign | 0.177 | benign | -1.729 | Destabilizing | 0.086 | N | 0.346 | neutral | None | None | None | None | N |
E/V | 0.188 | likely_benign | 0.1884 | benign | -0.222 | Destabilizing | 0.976 | D | 0.715 | prob.delet. | N | 0.486096133 | None | None | N |
E/W | 0.9223 | likely_pathogenic | 0.9157 | pathogenic | -0.3 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
E/Y | 0.6399 | likely_pathogenic | 0.6308 | pathogenic | -0.221 | Destabilizing | 0.998 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.