Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25482 | 76669;76670;76671 | chr2:178569688;178569687;178569686 | chr2:179434415;179434414;179434413 |
N2AB | 23841 | 71746;71747;71748 | chr2:178569688;178569687;178569686 | chr2:179434415;179434414;179434413 |
N2A | 22914 | 68965;68966;68967 | chr2:178569688;178569687;178569686 | chr2:179434415;179434414;179434413 |
N2B | 16417 | 49474;49475;49476 | chr2:178569688;178569687;178569686 | chr2:179434415;179434414;179434413 |
Novex-1 | 16542 | 49849;49850;49851 | chr2:178569688;178569687;178569686 | chr2:179434415;179434414;179434413 |
Novex-2 | 16609 | 50050;50051;50052 | chr2:178569688;178569687;178569686 | chr2:179434415;179434414;179434413 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | None | None | 0.792 | N | 0.741 | 0.329 | 0.633141044442 | gnomAD-4.0.0 | 2.0538E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.53075E-05 | None | 0 | 0 | 1.79945E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.4742 | ambiguous | 0.558 | ambiguous | -1.742 | Destabilizing | 0.543 | D | 0.733 | prob.delet. | None | None | None | None | N |
C/D | 0.9171 | likely_pathogenic | 0.9537 | pathogenic | -1.892 | Destabilizing | 0.984 | D | 0.781 | deleterious | None | None | None | None | N |
C/E | 0.9341 | likely_pathogenic | 0.9642 | pathogenic | -1.679 | Destabilizing | 0.953 | D | 0.785 | deleterious | None | None | None | None | N |
C/F | 0.283 | likely_benign | 0.3091 | benign | -1.061 | Destabilizing | 0.007 | N | 0.627 | neutral | N | 0.451485806 | None | None | N |
C/G | 0.3452 | ambiguous | 0.4352 | ambiguous | -2.061 | Highly Destabilizing | 0.939 | D | 0.759 | deleterious | N | 0.470595089 | None | None | N |
C/H | 0.5643 | likely_pathogenic | 0.6657 | pathogenic | -2.301 | Highly Destabilizing | 0.996 | D | 0.761 | deleterious | None | None | None | None | N |
C/I | 0.7087 | likely_pathogenic | 0.757 | pathogenic | -0.879 | Destabilizing | 0.59 | D | 0.729 | prob.delet. | None | None | None | None | N |
C/K | 0.8457 | likely_pathogenic | 0.9101 | pathogenic | -1.637 | Destabilizing | 0.953 | D | 0.777 | deleterious | None | None | None | None | N |
C/L | 0.6251 | likely_pathogenic | 0.6777 | pathogenic | -0.879 | Destabilizing | 0.009 | N | 0.469 | neutral | None | None | None | None | N |
C/M | 0.7122 | likely_pathogenic | 0.7638 | pathogenic | -0.276 | Destabilizing | 0.91 | D | 0.768 | deleterious | None | None | None | None | N |
C/N | 0.7269 | likely_pathogenic | 0.8234 | pathogenic | -2.098 | Highly Destabilizing | 0.984 | D | 0.788 | deleterious | None | None | None | None | N |
C/P | 0.9976 | likely_pathogenic | 0.9986 | pathogenic | -1.146 | Destabilizing | 0.984 | D | 0.785 | deleterious | None | None | None | None | N |
C/Q | 0.694 | likely_pathogenic | 0.7947 | pathogenic | -1.663 | Destabilizing | 0.984 | D | 0.78 | deleterious | None | None | None | None | N |
C/R | 0.4664 | ambiguous | 0.5766 | pathogenic | -1.923 | Destabilizing | 0.939 | D | 0.785 | deleterious | N | 0.423181696 | None | None | N |
C/S | 0.3044 | likely_benign | 0.3909 | ambiguous | -2.395 | Highly Destabilizing | 0.815 | D | 0.751 | deleterious | N | 0.410196543 | None | None | N |
C/T | 0.5263 | ambiguous | 0.639 | pathogenic | -2.028 | Highly Destabilizing | 0.742 | D | 0.75 | deleterious | None | None | None | None | N |
C/V | 0.6195 | likely_pathogenic | 0.6783 | pathogenic | -1.146 | Destabilizing | 0.59 | D | 0.736 | prob.delet. | None | None | None | None | N |
C/W | 0.6512 | likely_pathogenic | 0.7066 | pathogenic | -1.535 | Destabilizing | 0.994 | D | 0.722 | prob.delet. | N | 0.515747928 | None | None | N |
C/Y | 0.4161 | ambiguous | 0.4699 | ambiguous | -1.335 | Destabilizing | 0.792 | D | 0.741 | deleterious | N | 0.449445578 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.