Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25486 | 76681;76682;76683 | chr2:178569676;178569675;178569674 | chr2:179434403;179434402;179434401 |
N2AB | 23845 | 71758;71759;71760 | chr2:178569676;178569675;178569674 | chr2:179434403;179434402;179434401 |
N2A | 22918 | 68977;68978;68979 | chr2:178569676;178569675;178569674 | chr2:179434403;179434402;179434401 |
N2B | 16421 | 49486;49487;49488 | chr2:178569676;178569675;178569674 | chr2:179434403;179434402;179434401 |
Novex-1 | 16546 | 49861;49862;49863 | chr2:178569676;178569675;178569674 | chr2:179434403;179434402;179434401 |
Novex-2 | 16613 | 50062;50063;50064 | chr2:178569676;178569675;178569674 | chr2:179434403;179434402;179434401 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.967 | N | 0.477 | 0.241 | 0.238705975628 | gnomAD-4.0.0 | 1.5937E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.78893E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2422 | likely_benign | 0.2671 | benign | 0.064 | Stabilizing | 0.916 | D | 0.581 | neutral | None | None | None | None | I |
K/C | 0.5945 | likely_pathogenic | 0.6489 | pathogenic | -0.246 | Destabilizing | 0.999 | D | 0.706 | prob.neutral | None | None | None | None | I |
K/D | 0.4518 | ambiguous | 0.4698 | ambiguous | -0.217 | Destabilizing | 0.845 | D | 0.53 | neutral | None | None | None | None | I |
K/E | 0.1361 | likely_benign | 0.1442 | benign | -0.232 | Destabilizing | 0.025 | N | 0.379 | neutral | N | 0.467628694 | None | None | I |
K/F | 0.7152 | likely_pathogenic | 0.7515 | pathogenic | -0.257 | Destabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | I |
K/G | 0.3694 | ambiguous | 0.4023 | ambiguous | -0.08 | Destabilizing | 0.916 | D | 0.495 | neutral | None | None | None | None | I |
K/H | 0.2844 | likely_benign | 0.3232 | benign | -0.235 | Destabilizing | 0.997 | D | 0.498 | neutral | None | None | None | None | I |
K/I | 0.2929 | likely_benign | 0.3242 | benign | 0.357 | Stabilizing | 0.983 | D | 0.631 | neutral | N | 0.476192249 | None | None | I |
K/L | 0.303 | likely_benign | 0.3405 | ambiguous | 0.357 | Stabilizing | 0.975 | D | 0.471 | neutral | None | None | None | None | I |
K/M | 0.2153 | likely_benign | 0.2392 | benign | 0.089 | Stabilizing | 0.999 | D | 0.513 | neutral | None | None | None | None | I |
K/N | 0.35 | ambiguous | 0.3777 | ambiguous | 0.207 | Stabilizing | 0.967 | D | 0.477 | neutral | N | 0.514574492 | None | None | I |
K/P | 0.6707 | likely_pathogenic | 0.6819 | pathogenic | 0.284 | Stabilizing | 0.987 | D | 0.521 | neutral | None | None | None | None | I |
K/Q | 0.1201 | likely_benign | 0.1331 | benign | 0.029 | Stabilizing | 0.935 | D | 0.484 | neutral | N | 0.502992061 | None | None | I |
K/R | 0.0768 | likely_benign | 0.0845 | benign | 0.016 | Stabilizing | 0.056 | N | 0.343 | neutral | N | 0.460068003 | None | None | I |
K/S | 0.2993 | likely_benign | 0.3321 | benign | -0.182 | Destabilizing | 0.916 | D | 0.519 | neutral | None | None | None | None | I |
K/T | 0.154 | likely_benign | 0.1684 | benign | -0.075 | Destabilizing | 0.967 | D | 0.473 | neutral | N | 0.495468656 | None | None | I |
K/V | 0.2575 | likely_benign | 0.2862 | benign | 0.284 | Stabilizing | 0.987 | D | 0.538 | neutral | None | None | None | None | I |
K/W | 0.7246 | likely_pathogenic | 0.7669 | pathogenic | -0.337 | Destabilizing | 0.999 | D | 0.72 | prob.delet. | None | None | None | None | I |
K/Y | 0.5636 | ambiguous | 0.6043 | pathogenic | 0.022 | Stabilizing | 0.996 | D | 0.593 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.