Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25499 | 76720;76721;76722 | chr2:178569637;178569636;178569635 | chr2:179434364;179434363;179434362 |
N2AB | 23858 | 71797;71798;71799 | chr2:178569637;178569636;178569635 | chr2:179434364;179434363;179434362 |
N2A | 22931 | 69016;69017;69018 | chr2:178569637;178569636;178569635 | chr2:179434364;179434363;179434362 |
N2B | 16434 | 49525;49526;49527 | chr2:178569637;178569636;178569635 | chr2:179434364;179434363;179434362 |
Novex-1 | 16559 | 49900;49901;49902 | chr2:178569637;178569636;178569635 | chr2:179434364;179434363;179434362 |
Novex-2 | 16626 | 50101;50102;50103 | chr2:178569637;178569636;178569635 | chr2:179434364;179434363;179434362 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | None | None | 0.012 | N | 0.393 | 0.041 | 0.0482279557977 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2686 | likely_benign | 0.2325 | benign | -2.351 | Highly Destabilizing | 0.034 | N | 0.631 | neutral | None | None | None | None | N |
I/C | 0.4796 | ambiguous | 0.4458 | ambiguous | -1.573 | Destabilizing | 0.823 | D | 0.731 | deleterious | None | None | None | None | N |
I/D | 0.7802 | likely_pathogenic | 0.7364 | pathogenic | -2.622 | Highly Destabilizing | 0.552 | D | 0.822 | deleterious | None | None | None | None | N |
I/E | 0.6297 | likely_pathogenic | 0.594 | pathogenic | -2.382 | Highly Destabilizing | 0.552 | D | 0.775 | deleterious | None | None | None | None | N |
I/F | 0.1722 | likely_benign | 0.1606 | benign | -1.41 | Destabilizing | 0.314 | N | 0.709 | prob.delet. | N | 0.510080244 | None | None | N |
I/G | 0.6162 | likely_pathogenic | 0.5359 | ambiguous | -2.883 | Highly Destabilizing | 0.552 | D | 0.741 | deleterious | None | None | None | None | N |
I/H | 0.4921 | ambiguous | 0.4607 | ambiguous | -2.171 | Highly Destabilizing | 0.934 | D | 0.814 | deleterious | None | None | None | None | N |
I/K | 0.4223 | ambiguous | 0.4021 | ambiguous | -1.884 | Destabilizing | 0.552 | D | 0.776 | deleterious | None | None | None | None | N |
I/L | 0.1233 | likely_benign | 0.1149 | benign | -0.814 | Destabilizing | 0.012 | N | 0.393 | neutral | N | 0.462112939 | None | None | N |
I/M | 0.1108 | likely_benign | 0.1003 | benign | -0.711 | Destabilizing | 0.314 | N | 0.742 | deleterious | N | 0.4918412 | None | None | N |
I/N | 0.3357 | likely_benign | 0.3031 | benign | -2.314 | Highly Destabilizing | 0.739 | D | 0.825 | deleterious | N | 0.460389375 | None | None | N |
I/P | 0.854 | likely_pathogenic | 0.8252 | pathogenic | -1.308 | Destabilizing | 0.552 | D | 0.829 | deleterious | None | None | None | None | N |
I/Q | 0.4292 | ambiguous | 0.4015 | ambiguous | -2.152 | Highly Destabilizing | 0.789 | D | 0.821 | deleterious | None | None | None | None | N |
I/R | 0.3507 | ambiguous | 0.328 | benign | -1.636 | Destabilizing | 0.552 | D | 0.821 | deleterious | None | None | None | None | N |
I/S | 0.3345 | likely_benign | 0.2887 | benign | -2.982 | Highly Destabilizing | 0.314 | N | 0.719 | prob.delet. | N | 0.457094012 | None | None | N |
I/T | 0.186 | likely_benign | 0.17 | benign | -2.585 | Highly Destabilizing | 0.061 | N | 0.702 | prob.delet. | N | 0.484779155 | None | None | N |
I/V | 0.0502 | likely_benign | 0.0498 | benign | -1.308 | Destabilizing | None | N | 0.168 | neutral | N | 0.370240141 | None | None | N |
I/W | 0.8089 | likely_pathogenic | 0.7821 | pathogenic | -1.731 | Destabilizing | 0.934 | D | 0.814 | deleterious | None | None | None | None | N |
I/Y | 0.4937 | ambiguous | 0.4685 | ambiguous | -1.42 | Destabilizing | 0.552 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.