Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25523 | 76792;76793;76794 | chr2:178569565;178569564;178569563 | chr2:179434292;179434291;179434290 |
N2AB | 23882 | 71869;71870;71871 | chr2:178569565;178569564;178569563 | chr2:179434292;179434291;179434290 |
N2A | 22955 | 69088;69089;69090 | chr2:178569565;178569564;178569563 | chr2:179434292;179434291;179434290 |
N2B | 16458 | 49597;49598;49599 | chr2:178569565;178569564;178569563 | chr2:179434292;179434291;179434290 |
Novex-1 | 16583 | 49972;49973;49974 | chr2:178569565;178569564;178569563 | chr2:179434292;179434291;179434290 |
Novex-2 | 16650 | 50173;50174;50175 | chr2:178569565;178569564;178569563 | chr2:179434292;179434291;179434290 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | None | None | 0.892 | N | 0.675 | 0.412 | 0.32082282376 | gnomAD-4.0.0 | 6.84503E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99645E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9044 | likely_pathogenic | 0.9199 | pathogenic | None | Stabilizing | 0.845 | D | 0.682 | prob.neutral | None | None | None | None | I |
R/C | 0.5164 | ambiguous | 0.5674 | pathogenic | -0.279 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | I |
R/D | 0.977 | likely_pathogenic | 0.9809 | pathogenic | -0.178 | Destabilizing | 0.975 | D | 0.671 | neutral | None | None | None | None | I |
R/E | 0.866 | likely_pathogenic | 0.8903 | pathogenic | -0.117 | Destabilizing | 0.845 | D | 0.683 | prob.neutral | None | None | None | None | I |
R/F | 0.906 | likely_pathogenic | 0.927 | pathogenic | -0.246 | Destabilizing | 0.996 | D | 0.685 | prob.neutral | None | None | None | None | I |
R/G | 0.8714 | likely_pathogenic | 0.8881 | pathogenic | -0.18 | Destabilizing | 0.892 | D | 0.623 | neutral | N | 0.515433286 | None | None | I |
R/H | 0.2723 | likely_benign | 0.3042 | benign | -0.63 | Destabilizing | 0.987 | D | 0.663 | neutral | None | None | None | None | I |
R/I | 0.7829 | likely_pathogenic | 0.8274 | pathogenic | 0.434 | Stabilizing | 0.987 | D | 0.689 | prob.neutral | None | None | None | None | I |
R/K | 0.2106 | likely_benign | 0.2249 | benign | -0.154 | Destabilizing | 0.025 | N | 0.415 | neutral | N | 0.475683322 | None | None | I |
R/L | 0.6857 | likely_pathogenic | 0.7323 | pathogenic | 0.434 | Stabilizing | 0.916 | D | 0.623 | neutral | None | None | None | None | I |
R/M | 0.7561 | likely_pathogenic | 0.8025 | pathogenic | -0.042 | Destabilizing | 0.999 | D | 0.647 | neutral | N | 0.493227655 | None | None | I |
R/N | 0.9496 | likely_pathogenic | 0.9575 | pathogenic | -0.045 | Destabilizing | 0.975 | D | 0.649 | neutral | None | None | None | None | I |
R/P | 0.8535 | likely_pathogenic | 0.8573 | pathogenic | 0.309 | Stabilizing | 0.987 | D | 0.679 | prob.neutral | None | None | None | None | I |
R/Q | 0.2939 | likely_benign | 0.3339 | benign | -0.1 | Destabilizing | 0.975 | D | 0.647 | neutral | None | None | None | None | I |
R/S | 0.9471 | likely_pathogenic | 0.9561 | pathogenic | -0.33 | Destabilizing | 0.892 | D | 0.675 | prob.neutral | N | 0.495501698 | None | None | I |
R/T | 0.8364 | likely_pathogenic | 0.8759 | pathogenic | -0.141 | Destabilizing | 0.967 | D | 0.636 | neutral | N | 0.484958768 | None | None | I |
R/V | 0.8242 | likely_pathogenic | 0.8628 | pathogenic | 0.309 | Stabilizing | 0.975 | D | 0.686 | prob.neutral | None | None | None | None | I |
R/W | 0.5082 | ambiguous | 0.5623 | ambiguous | -0.348 | Destabilizing | 0.999 | D | 0.716 | prob.delet. | D | 0.523448684 | None | None | I |
R/Y | 0.7963 | likely_pathogenic | 0.8334 | pathogenic | 0.064 | Stabilizing | 0.996 | D | 0.679 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.