Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2554 | 7885;7886;7887 | chr2:178773304;178773303;178773302 | chr2:179638031;179638030;179638029 |
N2AB | 2554 | 7885;7886;7887 | chr2:178773304;178773303;178773302 | chr2:179638031;179638030;179638029 |
N2A | 2554 | 7885;7886;7887 | chr2:178773304;178773303;178773302 | chr2:179638031;179638030;179638029 |
N2B | 2508 | 7747;7748;7749 | chr2:178773304;178773303;178773302 | chr2:179638031;179638030;179638029 |
Novex-1 | 2508 | 7747;7748;7749 | chr2:178773304;178773303;178773302 | chr2:179638031;179638030;179638029 |
Novex-2 | 2508 | 7747;7748;7749 | chr2:178773304;178773303;178773302 | chr2:179638031;179638030;179638029 |
Novex-3 | 2554 | 7885;7886;7887 | chr2:178773304;178773303;178773302 | chr2:179638031;179638030;179638029 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.997 | N | 0.547 | 0.259 | 0.404315859256 | gnomAD-4.0.0 | 6.84144E-07 | None | None | None | None | N | None | 0 | 2.23704E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/L | None | None | 0.997 | N | 0.659 | 0.259 | 0.348764635752 | gnomAD-4.0.0 | 6.84144E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99327E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2963 | likely_benign | 0.3233 | benign | -2.387 | Highly Destabilizing | 0.999 | D | 0.664 | neutral | N | 0.497249853 | None | None | N |
V/C | 0.8906 | likely_pathogenic | 0.8749 | pathogenic | -1.694 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
V/D | 0.9862 | likely_pathogenic | 0.9828 | pathogenic | -3.377 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | D | 0.601570768 | None | None | N |
V/E | 0.974 | likely_pathogenic | 0.9696 | pathogenic | -3.051 | Highly Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
V/F | 0.9203 | likely_pathogenic | 0.8815 | pathogenic | -1.374 | Destabilizing | 1.0 | D | 0.856 | deleterious | D | 0.601418883 | None | None | N |
V/G | 0.6046 | likely_pathogenic | 0.5967 | pathogenic | -2.989 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | D | 0.538102589 | None | None | N |
V/H | 0.9965 | likely_pathogenic | 0.9952 | pathogenic | -2.865 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
V/I | 0.2181 | likely_benign | 0.1946 | benign | -0.623 | Destabilizing | 0.997 | D | 0.547 | neutral | N | 0.479981992 | None | None | N |
V/K | 0.99 | likely_pathogenic | 0.9875 | pathogenic | -1.956 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
V/L | 0.8366 | likely_pathogenic | 0.7978 | pathogenic | -0.623 | Destabilizing | 0.997 | D | 0.659 | neutral | N | 0.503247197 | None | None | N |
V/M | 0.7067 | likely_pathogenic | 0.6421 | pathogenic | -0.861 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
V/N | 0.9504 | likely_pathogenic | 0.9436 | pathogenic | -2.678 | Highly Destabilizing | 1.0 | D | 0.925 | deleterious | None | None | None | None | N |
V/P | 0.9946 | likely_pathogenic | 0.9942 | pathogenic | -1.195 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
V/Q | 0.9819 | likely_pathogenic | 0.9775 | pathogenic | -2.309 | Highly Destabilizing | 1.0 | D | 0.925 | deleterious | None | None | None | None | N |
V/R | 0.9831 | likely_pathogenic | 0.9775 | pathogenic | -2.068 | Highly Destabilizing | 1.0 | D | 0.929 | deleterious | None | None | None | None | N |
V/S | 0.689 | likely_pathogenic | 0.7092 | pathogenic | -3.151 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
V/T | 0.3798 | ambiguous | 0.4117 | ambiguous | -2.668 | Highly Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
V/W | 0.9988 | likely_pathogenic | 0.9982 | pathogenic | -1.924 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
V/Y | 0.9883 | likely_pathogenic | 0.9839 | pathogenic | -1.619 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.