Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25541 | 76846;76847;76848 | chr2:178569511;178569510;178569509 | chr2:179434238;179434237;179434236 |
N2AB | 23900 | 71923;71924;71925 | chr2:178569511;178569510;178569509 | chr2:179434238;179434237;179434236 |
N2A | 22973 | 69142;69143;69144 | chr2:178569511;178569510;178569509 | chr2:179434238;179434237;179434236 |
N2B | 16476 | 49651;49652;49653 | chr2:178569511;178569510;178569509 | chr2:179434238;179434237;179434236 |
Novex-1 | 16601 | 50026;50027;50028 | chr2:178569511;178569510;178569509 | chr2:179434238;179434237;179434236 |
Novex-2 | 16668 | 50227;50228;50229 | chr2:178569511;178569510;178569509 | chr2:179434238;179434237;179434236 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.988 | D | 0.617 | 0.521 | 0.501308276186 | gnomAD-4.0.0 | 1.59406E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86377E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1281 | likely_benign | 0.1346 | benign | -0.429 | Destabilizing | 0.919 | D | 0.51 | neutral | N | 0.494406197 | None | None | N |
E/C | 0.7605 | likely_pathogenic | 0.7903 | pathogenic | -0.238 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
E/D | 0.1228 | likely_benign | 0.1355 | benign | -0.53 | Destabilizing | 0.958 | D | 0.416 | neutral | N | 0.512953631 | None | None | N |
E/F | 0.6898 | likely_pathogenic | 0.7159 | pathogenic | -0.191 | Destabilizing | 0.995 | D | 0.756 | deleterious | None | None | None | None | N |
E/G | 0.2182 | likely_benign | 0.2321 | benign | -0.665 | Destabilizing | 0.988 | D | 0.617 | neutral | D | 0.526450878 | None | None | N |
E/H | 0.3751 | ambiguous | 0.3996 | ambiguous | -0.028 | Destabilizing | 1.0 | D | 0.609 | neutral | None | None | None | None | N |
E/I | 0.2223 | likely_benign | 0.2312 | benign | 0.171 | Stabilizing | 0.991 | D | 0.753 | deleterious | None | None | None | None | N |
E/K | 0.1259 | likely_benign | 0.1249 | benign | 0.005 | Stabilizing | 0.958 | D | 0.474 | neutral | N | 0.519167527 | None | None | N |
E/L | 0.2883 | likely_benign | 0.3041 | benign | 0.171 | Stabilizing | 0.982 | D | 0.667 | neutral | None | None | None | None | N |
E/M | 0.3374 | likely_benign | 0.3537 | ambiguous | 0.202 | Stabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/N | 0.1796 | likely_benign | 0.1924 | benign | -0.299 | Destabilizing | 0.991 | D | 0.587 | neutral | None | None | None | None | N |
E/P | 0.9098 | likely_pathogenic | 0.923 | pathogenic | -0.008 | Destabilizing | 0.995 | D | 0.714 | prob.delet. | None | None | None | None | N |
E/Q | 0.1264 | likely_benign | 0.1309 | benign | -0.247 | Destabilizing | 0.994 | D | 0.555 | neutral | N | 0.508297173 | None | None | N |
E/R | 0.2403 | likely_benign | 0.2496 | benign | 0.304 | Stabilizing | 0.991 | D | 0.61 | neutral | None | None | None | None | N |
E/S | 0.1581 | likely_benign | 0.172 | benign | -0.489 | Destabilizing | 0.938 | D | 0.478 | neutral | None | None | None | None | N |
E/T | 0.1438 | likely_benign | 0.1484 | benign | -0.304 | Destabilizing | 0.086 | N | 0.35 | neutral | None | None | None | None | N |
E/V | 0.1362 | likely_benign | 0.1413 | benign | -0.008 | Destabilizing | 0.976 | D | 0.613 | neutral | D | 0.534291695 | None | None | N |
E/W | 0.889 | likely_pathogenic | 0.9043 | pathogenic | -0.024 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
E/Y | 0.554 | ambiguous | 0.587 | pathogenic | 0.045 | Stabilizing | 0.998 | D | 0.75 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.