Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25548 | 76867;76868;76869 | chr2:178569490;178569489;178569488 | chr2:179434217;179434216;179434215 |
N2AB | 23907 | 71944;71945;71946 | chr2:178569490;178569489;178569488 | chr2:179434217;179434216;179434215 |
N2A | 22980 | 69163;69164;69165 | chr2:178569490;178569489;178569488 | chr2:179434217;179434216;179434215 |
N2B | 16483 | 49672;49673;49674 | chr2:178569490;178569489;178569488 | chr2:179434217;179434216;179434215 |
Novex-1 | 16608 | 50047;50048;50049 | chr2:178569490;178569489;178569488 | chr2:179434217;179434216;179434215 |
Novex-2 | 16675 | 50248;50249;50250 | chr2:178569490;178569489;178569488 | chr2:179434217;179434216;179434215 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | None | None | 0.983 | N | 0.634 | 0.459 | 0.410603549233 | gnomAD-4.0.0 | 1.59375E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86334E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1478 | likely_benign | 0.1508 | benign | None | Stabilizing | 0.892 | D | 0.509 | neutral | N | 0.480165925 | None | None | N |
D/C | 0.5478 | ambiguous | 0.5617 | ambiguous | -0.303 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
D/E | 0.1226 | likely_benign | 0.1107 | benign | -0.535 | Destabilizing | 0.011 | N | 0.285 | neutral | N | 0.450551938 | None | None | N |
D/F | 0.5236 | ambiguous | 0.5472 | ambiguous | -0.15 | Destabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | N |
D/G | 0.1165 | likely_benign | 0.117 | benign | -0.077 | Destabilizing | 0.892 | D | 0.549 | neutral | N | 0.425607847 | None | None | N |
D/H | 0.2917 | likely_benign | 0.3038 | benign | 0.548 | Stabilizing | 0.995 | D | 0.571 | neutral | N | 0.464708243 | None | None | N |
D/I | 0.3624 | ambiguous | 0.3589 | ambiguous | 0.135 | Stabilizing | 0.987 | D | 0.632 | neutral | None | None | None | None | N |
D/K | 0.4045 | ambiguous | 0.3841 | ambiguous | 0.288 | Stabilizing | 0.845 | D | 0.548 | neutral | None | None | None | None | N |
D/L | 0.3597 | ambiguous | 0.3614 | ambiguous | 0.135 | Stabilizing | 0.975 | D | 0.625 | neutral | None | None | None | None | N |
D/M | 0.5386 | ambiguous | 0.5377 | ambiguous | -0.109 | Destabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | N |
D/N | 0.098 | likely_benign | 0.0988 | benign | 0.081 | Stabilizing | 0.967 | D | 0.599 | neutral | N | 0.468790982 | None | None | N |
D/P | 0.6033 | likely_pathogenic | 0.6099 | pathogenic | 0.106 | Stabilizing | 0.987 | D | 0.592 | neutral | None | None | None | None | N |
D/Q | 0.3271 | likely_benign | 0.3233 | benign | 0.057 | Stabilizing | 0.95 | D | 0.629 | neutral | None | None | None | None | N |
D/R | 0.448 | ambiguous | 0.4372 | ambiguous | 0.532 | Stabilizing | 0.975 | D | 0.569 | neutral | None | None | None | None | N |
D/S | 0.117 | likely_benign | 0.122 | benign | -0.007 | Destabilizing | 0.916 | D | 0.545 | neutral | None | None | None | None | N |
D/T | 0.2161 | likely_benign | 0.2202 | benign | 0.061 | Stabilizing | 0.975 | D | 0.579 | neutral | None | None | None | None | N |
D/V | 0.2285 | likely_benign | 0.2272 | benign | 0.106 | Stabilizing | 0.983 | D | 0.634 | neutral | N | 0.487927833 | None | None | N |
D/W | 0.8388 | likely_pathogenic | 0.8486 | pathogenic | -0.135 | Destabilizing | 0.999 | D | 0.676 | prob.neutral | None | None | None | None | N |
D/Y | 0.233 | likely_benign | 0.2478 | benign | 0.063 | Stabilizing | 0.999 | D | 0.619 | neutral | N | 0.499030648 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.