Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25556 | 76891;76892;76893 | chr2:178569466;178569465;178569464 | chr2:179434193;179434192;179434191 |
N2AB | 23915 | 71968;71969;71970 | chr2:178569466;178569465;178569464 | chr2:179434193;179434192;179434191 |
N2A | 22988 | 69187;69188;69189 | chr2:178569466;178569465;178569464 | chr2:179434193;179434192;179434191 |
N2B | 16491 | 49696;49697;49698 | chr2:178569466;178569465;178569464 | chr2:179434193;179434192;179434191 |
Novex-1 | 16616 | 50071;50072;50073 | chr2:178569466;178569465;178569464 | chr2:179434193;179434192;179434191 |
Novex-2 | 16683 | 50272;50273;50274 | chr2:178569466;178569465;178569464 | chr2:179434193;179434192;179434191 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1707317089 | None | 0.019 | N | 0.303 | 0.055 | 0.564872276104 | gnomAD-4.0.0 | 6.846E-06 | None | None | None | None | N | None | 0 | 2.23844E-05 | None | 0 | 0 | None | 0 | 0 | 8.09886E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1491 | likely_benign | 0.1683 | benign | -0.841 | Destabilizing | 0.025 | N | 0.382 | neutral | None | None | None | None | N |
I/C | 0.4686 | ambiguous | 0.5126 | ambiguous | -0.735 | Destabilizing | 0.859 | D | 0.571 | neutral | None | None | None | None | N |
I/D | 0.3847 | ambiguous | 0.4195 | ambiguous | -0.403 | Destabilizing | 0.22 | N | 0.531 | neutral | None | None | None | None | N |
I/E | 0.3005 | likely_benign | 0.3011 | benign | -0.469 | Destabilizing | 0.055 | N | 0.444 | neutral | None | None | None | None | N |
I/F | 0.1286 | likely_benign | 0.1361 | benign | -0.678 | Destabilizing | 0.124 | N | 0.452 | neutral | None | None | None | None | N |
I/G | 0.3699 | ambiguous | 0.42 | ambiguous | -1.047 | Destabilizing | 0.104 | N | 0.514 | neutral | None | None | None | None | N |
I/H | 0.2445 | likely_benign | 0.254 | benign | -0.28 | Destabilizing | 0.667 | D | 0.633 | neutral | None | None | None | None | N |
I/K | 0.1912 | likely_benign | 0.1793 | benign | -0.612 | Destabilizing | 0.042 | N | 0.448 | neutral | N | 0.417731096 | None | None | N |
I/L | 0.092 | likely_benign | 0.0915 | benign | -0.4 | Destabilizing | None | N | 0.107 | neutral | N | 0.449979588 | None | None | N |
I/M | 0.0754 | likely_benign | 0.0747 | benign | -0.462 | Destabilizing | 0.003 | N | 0.249 | neutral | N | 0.473221807 | None | None | N |
I/N | 0.1076 | likely_benign | 0.1145 | benign | -0.455 | Destabilizing | 0.22 | N | 0.571 | neutral | None | None | None | None | N |
I/P | 0.8011 | likely_pathogenic | 0.8445 | pathogenic | -0.514 | Destabilizing | 0.364 | N | 0.619 | neutral | None | None | None | None | N |
I/Q | 0.1747 | likely_benign | 0.1761 | benign | -0.651 | Destabilizing | 0.001 | N | 0.389 | neutral | None | None | None | None | N |
I/R | 0.1726 | likely_benign | 0.1649 | benign | -0.034 | Destabilizing | None | N | 0.438 | neutral | N | 0.386386682 | None | None | N |
I/S | 0.1291 | likely_benign | 0.1399 | benign | -0.921 | Destabilizing | 0.104 | N | 0.437 | neutral | None | None | None | None | N |
I/T | 0.1057 | likely_benign | 0.1148 | benign | -0.875 | Destabilizing | 0.081 | N | 0.421 | neutral | N | 0.401878996 | None | None | N |
I/V | 0.0594 | likely_benign | 0.0622 | benign | -0.514 | Destabilizing | 0.019 | N | 0.303 | neutral | N | 0.456617558 | None | None | N |
I/W | 0.6452 | likely_pathogenic | 0.6839 | pathogenic | -0.715 | Destabilizing | 0.958 | D | 0.617 | neutral | None | None | None | None | N |
I/Y | 0.3432 | ambiguous | 0.3673 | ambiguous | -0.48 | Destabilizing | 0.364 | N | 0.575 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.